RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CLASP2O75122 1294 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 SLC6A4P31645 630 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 SOX11P35716 441 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 EFL1Q7Z2Z2 1120 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CPSF7Q8N684 471 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ASIC4Q96FT7 647 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 AARSD1Q9BTE6 412 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 MARCH5Q9NX47 278 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ILVBLA1L0T0 632 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ENO4A6NNW6 628 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 MUSKO15146 869 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 AKAP10O43572 662 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 NRP2O60462 931 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 PEX11BO96011 259 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 PRSS56P0CW18 603 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 HGFP14210 728 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CD1DP15813 335 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CTPS1P17812 591 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 LBPP18428 481 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ITGB6P18564 788 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 SP100P23497 879 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 AQP4P55087 323 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 NKX3-2P78367 333 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 RALGDSQ12967 914 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 IKBKEQ14164 716 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 TSNQ15631 228 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ADGRF1Q5T601 910 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 PAOXQ6QHF9 649 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 RSPO2Q6UXX9 243 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ISCA2Q86U28 154 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 GPSM1Q86YR5 675 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CLPBQ9H078 707 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 MROH6A6NGR9 719 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 PKMP14618 531 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 RFTN1Q14699 578 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ARMC12Q5T9G4 340 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 OR6K2Q8NGY2 324 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 DPF3Q92784 378 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 RIC8BQ9NVN3 520 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 NDUFAF1Q9Y375 327 aa11.53□□□□□ -0.56
PDXDC1-202ENST00000396410 UQCRBP14927 111 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 ATF6P18850 670 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 MFN1Q8IWA4 741 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 PEX13Q92968 403 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 FATE1Q969F0 183 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 LINGO1Q96FE5 620 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 DEFB118Q96PH6 123 aa11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 TFB2MQ9H5Q4 396 aaKnown RBP11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 AFF4Q9UHB7 1163 aaKnown RBP11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 MTF2Q9Y483 593 aaPredicted RBP11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 ZNF638Q14966 1978 aaKnown RBP11.52□□□□□ -0.56
PDXDC1-202ENST00000396410 ZNF840PA6NDX5 716 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 IGHA2P01877 340 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 LYNP07948 512 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 FDXRP22570 491 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 XIAPP98170 497 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 CLCQ05315 142 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 RETSATQ6NUM9 610 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 PGM2L1Q6PCE3 622 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 OR56A4Q8NGH8 313 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 SEMA6AQ9H2E6 1030 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 NLE1Q9NVX2 485 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 CRLS1Q9UJA2 301 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 A0A0J9YYE9 177 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 SNAP91O60641 907 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 BAIAP3O94812 1187 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 HDCP19113 662 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 HMOX2P30519 316 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 RGS4P49798 205 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 SCIMPQ6UWF3 145 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TMEM173Q86WV6 379 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 KBTBD2Q8IY47 623 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TMEM151AQ8N4L1 468 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 SIDT2Q8NBJ9 832 aaKnown RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TRIM4Q9C037 500 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 MEAF6Q9HAF1 191 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TIMM22Q9Y584 194 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 A8MX80 341 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TARM1B6A8C7 271 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 ADAM12O43184 909 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TMCC1O94876 653 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 TRIM16O95361 564 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 FOLH1Q04609 750 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 MRPL58Q14197 206 aaKnown RBP11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
PDXDC1-202ENST00000396410 ADGRG6Q86SQ4 1221 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms