RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LHX3Q9UBR4 397 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 ADAMTS6Q9UKP5 1117 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 OBSL1O75147 1896 aa16.74■□□□□ 0.27
NUP50-202ENST00000396096 ANKRD66B4E2M5 251 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 NDUFS3O75489 264 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 TMCC1O94876 653 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 UPP2O95045 317 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 IRF1P10914 325 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 ENO3P13929 434 aaPredicted RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 DPP6P42658 865 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 NAA20P61599 178 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 TRAF2Q12933 501 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 GK5Q6ZS86 529 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 DEFB128Q7Z7B8 93 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 SLC39A11Q8N1S5 342 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 TTC30BQ8N4P2 665 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 NR1H4Q96RI1 486 aaPredicted RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 MRPL1Q9BYD6 325 aaKnown RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 HACD3Q9P035 362 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PSMD13Q9UNM6 376 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PCDHGC4Q9Y5F7 938 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 UBA6A0AVT1 1052 aaPredicted RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 UBXN8O00124 270 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PEX1O43933 1283 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 GPC4O75487 556 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 SRP72O76094 671 aaKnown RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 CDK14O94921 469 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 C1RP00736 705 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 RAG1P15918 1043 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 ME2P23368 584 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 FMO4P31512 558 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 ACADVLP49748 655 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 SH3BP2P78314 561 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 RAD51Q06609 339 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 IKBKEQ14164 716 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 PPP1R3AQ16821 1122 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 ZFP1Q6P2D0 407 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PAQR3Q6TCH7 311 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 TMEM150AQ86TG1 271 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 PDSS2Q86YH6 399 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 RYBPQ8N488 228 aaPredicted RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 NKAPQ8N5F7 415 aaKnown RBP16.73■□□□□ 0.27
NUP50-202ENST00000396096 C19orf60Q96EN9 201 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 BIRC8Q96P09 236 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 NPAS2Q99743 824 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 OR51B4Q9Y5P0 310 aa16.73■□□□□ 0.27
NUP50-202ENST00000396096 LTBP2Q14767 1821 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 PFDN6O15212 129 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 PYGLP06737 847 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 XRCC1P18887 633 aaPredicted RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 TTPAP49638 278 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 CLCN4P51793 760 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 KANK2Q63ZY3 851 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 CLEC6AQ6EIG7 209 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 APLFQ8IW19 511 aaPredicted RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 HJURPQ8NCD3 748 aaPredicted RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 GATA6Q92908 595 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 TOX2Q96NM4 488 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 C1QTNF3Q9BXJ4 246 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 KLHL4Q9C0H6 718 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 MRPL40Q9NQ50 206 aaKnown RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 C6orf203Q9P0P8 240 aaPredicted RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 DNMT3BQ9UBC3 853 aaKnown RBP16.72■□□□□ 0.27
NUP50-202ENST00000396096 MAFFQ9ULX9 164 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 COMMD10Q9Y6G5 202 aa16.72■□□□□ 0.27
NUP50-202ENST00000396096 KLK8O60259 260 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FZD6O60353 706 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 GREM1O60565 184 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SNAP91O60641 907 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 BCAS2O75934 225 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 OLFM2O95897 454 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 MBL2P11226 248 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 PKMP14618 531 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 ADARP55265 1226 aaKnown RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 LRP8Q14114 963 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FLOT2Q14254 428 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 HACD2Q6Y1H2 254 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 DNAJB7Q7Z6W7 309 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 TMEM126BQ8IUX1 230 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 FAM217AQ8IXS0 508 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 TCEAL8Q8IYN2 117 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 HIPK4Q8NE63 616 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 MICAL1Q8TDZ2 1067 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 DLG3Q92796 817 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 EXT2Q93063 718 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 PPP2R3CQ969Q6 453 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 ZNF689Q96CS4 500 aaPredicted RBP16.71■□□□□ 0.27
NUP50-202ENST00000396096 ZNF558Q96NG5 402 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 DEFB118Q96PH6 123 aa16.71■□□□□ 0.27
NUP50-202ENST00000396096 SLC25A23Q9BV35 468 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms