RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ATG16L1Q676U5 607 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 OTOAQ7RTW8 1153 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 SPATA21Q7Z572 469 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 CCDC91Q7Z6B0 441 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 CCDC197Q8NCU1 140 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 TTC8Q8TAM2 541 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 AARSD1Q9BTE6 412 aaKnown RBP17.45■□□□□ 0.38
MBD4-202ENST00000393278 RUVBL2Q9Y230 463 aaKnown RBP17.45■□□□□ 0.38
MBD4-202ENST00000393278 SLC30A1Q9Y6M5 507 aa17.45■□□□□ 0.38
MBD4-202ENST00000393278 MUC22E2RYF6 1773 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 SCN8AQ9UQD0 1980 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 GAPDHSO14556 408 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 PFDN6O15212 129 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 WISP3O95389 354 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 IL1BP01584 269 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 CPA3P15088 417 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 BPIP17213 487 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 FDXRP22570 491 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 GDI1P31150 447 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 EIF2DP41214 584 aaKnown RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 SUOXP51687 545 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
MBD4-202ENST00000393278 DLG1Q12959 904 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 FNDC3BQ53EP0 1204 aaKnown RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 LRRC66Q68CR7 880 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 NAIF1Q69YI7 327 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 TBC1D1Q86TI0 1168 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 ZNF366Q8N895 744 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 NXNL1Q96CM4 212 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 GPR78Q96P69 363 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 TTYH1Q9H313 450 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 FAM96AQ9H5X1 160 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 MID2Q9UJV3 735 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 APPL1Q9UKG1 709 aa17.44■□□□□ 0.38
MBD4-202ENST00000393278 USP15Q9Y4E8 981 aaPredicted RBP17.44■□□□□ 0.38
MBD4-202ENST00000393278 ZNF106Q9H2Y7 1883 aaKnown RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 UBA6A0AVT1 1052 aaPredicted RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 A8MX80 341 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 DNAJC6O75061 913 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 SRP72O76094 671 aaKnown RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 KCNA4P22459 653 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 LHCGRP22888 699 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 TIAL1Q01085 375 aaKnown RBP eCLIP17.43■□□□□ 0.38
MBD4-202ENST00000393278 BST1Q10588 318 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 ITIH4Q14624 930 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 LRIT3Q3SXY7 679 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 CES4AQ5XG92 561 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 LRRC8EQ6NSJ5 796 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 C10orf107Q8IVU9 208 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 SFTPA1Q8IWL2 248 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 SMRP1Q8NCR6 262 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 RDH11Q8TC12 318 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.43■□□□□ 0.38
MBD4-202ENST00000393278 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 RPP25Q9BUL9 199 aaKnown RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 TRMT61BQ9BVS5 477 aaKnown RBP17.43■□□□□ 0.38
MBD4-202ENST00000393278 POPDC3Q9HBV1 291 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 GPAMQ9HCL2 828 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 IL26Q9NPH9 171 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 DKK3Q9UBP4 350 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 B4GALT6Q9UBX8 382 aa17.43■□□□□ 0.38
MBD4-202ENST00000393278 TMEM265A0A087WTH1 108 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 TBC1D3BA6NDS4 549 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 G3V2L1 256 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 ARNTLO00327 626 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 PRAMEF1O95521 474 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 FGF3P11487 239 aaPredicted RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 POU3F3P20264 500 aaPredicted RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 SPAM1P38567 509 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 SLC26A3P40879 764 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 KPNA2P52292 529 aaKnown RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 PTPN5P54829 565 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 SEMG2Q02383 582 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 ZNF234Q14588 700 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 HNRNPA1L2Q32P51 320 aaKnown RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 ITPRIPL2Q3MIP1 535 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 ZNF805Q5CZA5 627 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 FAM151BQ6UXP7 276 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 CERS6Q6ZMG9 384 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 MTSS1LQ765P7 747 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 TAS2R42Q7RTR8 314 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 PIM3Q86V86 326 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 SPATS2Q86XZ4 545 aaKnown RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 FSTL5Q8N475 847 aaPredicted RBP17.42■□□□□ 0.38
MBD4-202ENST00000393278 TMEM151AQ8N4L1 468 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 ANKS4BQ8N8V4 417 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 HCAR2Q8TDS4 363 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 SCYL1Q96KG9 808 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 UBXN10Q96LJ8 280 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 NECTIN4Q96NY8 510 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 IGSF5Q9NSI5 407 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 SZT2Q5T011 3432 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 EDDM13A0A1B0GTR0 161 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 TARM1B6A8C7 271 aa17.42■□□□□ 0.38
MBD4-202ENST00000393278 TK2O00142 265 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms