RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 EPHB1P54762 984 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CSE1LP55060 971 aaKnown RBP13.56□□□□□ -0.24
PTN-202ENST00000393083 QPCTQ16769 361 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CARD16Q5EG05 197 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 GRTP1Q5TC63 336 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 MROH9Q5TGP6 573 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CAMK1DQ8IU85 385 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 SUMF1Q8NBK3 374 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 OR13J1Q8NGT2 312 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 MGARPQ8TDB4 240 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 RBBP8Q99708 897 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 ATP13A3Q9H7F0 1226 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 INTS9Q9NV88 658 aaKnown RBP13.56□□□□□ -0.24
PTN-202ENST00000393083 PSD3Q9NYI0 1048 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 GGT7Q9UJ14 662 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CYP8B1Q9UNU6 501 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
PTN-202ENST00000393083 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 PCDHB9Q9Y5E1 797 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 FAM47DPA6NHR8 397 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 A6NNZ2 444 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 ANKRD66B4E2M5 251 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 MID1O15344 667 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTN-202ENST00000393083 FZD6O60353 706 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 SLC4A1P02730 911 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 ITGA2BP08514 1039 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 F7P08709 466 aaPredicted RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 ACADMP11310 421 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SERPINA4P29622 427 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SLC8A1P32418 973 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 CCNHP51946 323 aaPredicted RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 METAP1P53582 386 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 PRAMEP78395 509 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SIM2Q14190 667 aaPredicted RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 KBTBD6Q86V97 674 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 CNTN4Q8IWV2 1026 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 STYXQ8WUJ0 223 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 PEX13Q92968 403 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 ALKBH8Q96BT7 664 aaKnown RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 ZC3H10Q96K80 434 aaKnown RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 DNAJC1Q96KC8 554 aaKnown RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 SMIM14Q96QK8 99 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 ZDHHC6Q9H6R6 413 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SSU72Q9NP77 194 aaKnown RBP13.55□□□□□ -0.24
PTN-202ENST00000393083 NKIRAS1Q9NYS0 192 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 SCML1Q9UN30 329 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 WASF2Q9Y6W5 498 aa13.55□□□□□ -0.24
PTN-202ENST00000393083 HMX2A2RU54 273 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 CCL22O00626 93 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 HTRA2O43464 458 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 ADH1BP00325 375 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 IL1BP01584 269 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 DNTTP04053 509 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 PYGBP11216 843 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 C5AR1P21730 350 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 SPRP35270 261 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 SLC1A2P43004 574 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 RECQLP46063 649 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 PSMD8P48556 350 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 ARSDP51689 593 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 ZNF140P52738 457 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 LIMK2P53671 638 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 TMPRSS15P98073 1019 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 ACVR1Q04771 509 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 TERF2Q15554 542 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 TAF1AQ15573 450 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 MYLK3Q32MK0 819 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 PLK5Q496M5 336 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 ZNF470Q6ECI4 717 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 MICALCLQ6ZW33 695 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 DSG4Q86SJ6 1040 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 AADATQ8N5Z0 425 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 OTUD6BQ8N6M0 293 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 TMIEQ8NEW7 156 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 OR13C4Q8NGS5 318 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 GABPB2Q8TAK5 448 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 PIP4K2CQ8TBX8 421 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 CALML6Q8TD86 181 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 FAM131CQ96AQ9 280 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 ATXN7L3BQ96GX2 97 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 APOPT1Q96IL0 206 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 TUBGCP5Q96RT8 1024 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 HEPHQ9BQS7 1158 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 WSB2Q9NYS7 404 aaPredicted RBP13.54□□□□□ -0.24
PTN-202ENST00000393083 HACD3Q9P035 362 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 SERGEFQ9UGK8 458 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 IL36AQ9UHA7 158 aa13.54□□□□□ -0.24
PTN-202ENST00000393083 RIMKLBQ9ULI2 386 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms