RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 FRMD3A2A2Y4 597 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 CPED1A4D0V7 1026 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 A6NCN8 305 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 BTBD18B2RXH4 712 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 VILLO15195 856 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ZNF12P17014 697 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 RRM1P23921 792 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 TNFRSF8P28908 595 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 HADHAP40939 763 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 PDLIM4P50479 330 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 DSCR9P59020 149 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ZBED6P86452 979 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ZXDBP98169 803 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 FOXM1Q08050 763 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 LRMPQ12912 555 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 SLC39A14Q15043 492 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 ACSM2BQ68CK6 577 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 CCNI2Q6ZMN8 369 aaPredicted RBP4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 CHST9Q7L1S5 443 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 NUDCD2Q8WVJ2 157 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 PPP1R13BQ96KQ4 1090 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 MARK4Q96L34 752 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 MMP25Q9NPA2 562 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 MAP3K20Q9NYL2 800 aaKnown RBP4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 MALT1Q9UDY8 824 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 FBXO2Q9UK22 296 aaPredicted RBP4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 RUSC2Q8N2Y8 1516 aa4.41□□□□□ -1.7
SNORA40.2-201ENST00000390847 HMGB1P1B2RPK0 211 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 ATP2A1O14983 1001 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 SCAMP1O15126 338 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 KDM4BO94953 1096 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 RB1P06400 928 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 UBA1P22314 1058 aaKnown RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 TM4SF1P30408 202 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 HOXC9P31274 260 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 PRCPP42785 496 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 CLCNKAP51800 687 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 HNRNPH2P55795 449 aaKnown RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 SEC61A1P61619 476 aaKnown RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 TUBA1BP68363 451 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 MC1RQ01726 317 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 GRIK2Q13002 908 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 NFATC4Q14934 902 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 PNLIPRP3Q17RR3 467 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 FAM205BPQ63HN1 556 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF517Q6ZMY9 492 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 FASTKD5Q7L8L6 764 aaKnown RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 WFIKKN2Q8TEU8 576 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 APBB2Q92870 758 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 RTP4Q96DX8 246 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 ELMOD3Q96FG2 381 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 GRAMD2BQ96HH9 432 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 CMKLR1Q99788 373 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 MAK16Q9BXY0 300 aaKnown RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 PIGMQ9H3S5 423 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 SEBOXQ9HB31 216 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 OR14J1Q9UGF5 321 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 VPS28Q9UK41 221 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF215Q9UL58 517 aaPredicted RBP4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 LOXL2Q9Y4K0 774 aa4.4□□□□□ -1.71
SNORA40.2-201ENST00000390847 CLEC18AA5D8T8 446 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 A8MZ25 164 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SPINT2O43291 252 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 HS6ST1O60243 411 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GPC4O75487 556 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GFPT2O94808 682 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 CLDN14O95500 239 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SRCP12931 536 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 PLA2G2AP14555 144 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 UBA7P41226 1012 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 CAMPP49913 170 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 TAS2R40P59535 323 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 ECT2LQ008S8 904 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GRSF1Q12849 480 aaKnown RBP eCLIP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 CDC16Q13042 620 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 IKQ13123 557 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 MAD2L1Q13257 205 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SF3B4Q15427 424 aaKnown RBP eCLIP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 OASLQ15646 514 aaKnown RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 KCNT1Q5JUK3 1230 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 NADSYN1Q6IA69 706 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SDCCAG8Q86SQ7 713 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 RNF168Q8IYW5 571 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 ADGRF2Q8IZF7 708 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SRBD1Q8N5C6 995 aaKnown RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 PCDH20Q8N6Y1 951 aaKnown RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms