RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ADGRE3Q9BY15 652 aa11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 MRPL40Q9NQ50 206 aaKnown RBP11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 PHPT1Q9NRX4 125 aaPredicted RBP11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 NCKIPSDQ9NZQ3 722 aa11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 SLC17A4Q9Y2C5 497 aa11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 ZNF106Q9H2Y7 1883 aaKnown RBP11.36□□□□□ -0.59
IGHV4-28-201ENST00000390612 LOC285095A0A1B0GVY8 99 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 PRSS38A1L453 326 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 RGSL1A5PLK6 1076 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 TRABD2BA6NFA1 517 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 DDX3YO15523 660 aaKnown RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 OPA1O60313 960 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 NDST3O95803 873 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 EPOP01588 193 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 IVLP07476 585 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ANXA6P08133 673 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 PYGMP11217 842 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 RWDD2BP57060 319 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 GSDMDP57764 484 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 DAB2P98082 770 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 CDK18Q07002 472 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ST3GAL2Q16842 350 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 HENMT1Q5T8I9 393 aaKnown RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 HES3Q5TGS1 186 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 GUSBP11Q6P575 273 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 TMC3Q7Z5M5 1100 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ZC3H18Q86VM9 953 aaKnown RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 CCDC50Q8IVM0 306 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ZNF567Q8N184 647 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ACTL9Q8TC94 416 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 GPBAR1Q8TDU6 330 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 HTR3CQ8WXA8 447 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 AP2M1Q96CW1 435 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 FCRL5Q96RD9 977 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 AGAP2Q99490 1192 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 TMEM168Q9H0V1 697 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 MAGEE1Q9HCI5 957 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 SEPT10Q9P0V9 454 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 NFKBIL1Q9UBC1 381 aaPredicted RBP11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 ST14Q9Y5Y6 855 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 PIKFYVEQ9Y2I7 2098 aa11.35□□□□□ -0.59
IGHV4-28-201ENST00000390612 C1orf232A0A0U1RR37 186 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 PYGLP06737 847 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 CTSEP14091 401 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 JUPP14923 745 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 NFKB1P19838 968 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 GPR1P46091 355 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 NAP1L1P55209 391 aaKnown RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 OTUD4Q01804 1114 aaKnown RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 TARDBPQ13148 414 aaKnown RBP eCLIP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 KLF1Q13351 362 aaPredicted RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 GALNT3Q14435 633 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 NR0B2Q15466 257 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 RAET1GQ6H3X3 334 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 AADACL2Q6P093 401 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 LYSMD3Q7Z3D4 306 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 RD3Q7Z3Z2 195 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 C17orf82Q86X59 251 aaPredicted RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 NRROSQ86YC3 692 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 KLHDC8BQ8IXV7 354 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 GPR156Q8NFN8 814 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 IFI44Q8TCB0 444 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 HAUS1Q96CS2 278 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 OXNAD1Q96HP4 312 aaPredicted RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 HES6Q96HZ4 224 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 MRGPRX2Q96LB1 330 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 GORASP1Q9BQQ3 440 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 RIOK2Q9BVS4 552 aaKnown RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 CYP4F12Q9HCS2 524 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 EVA1BQ9NVM1 165 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 TRNAU1APQ9NX07 287 aaKnown RBP11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 FAM153AQ9UHL3 310 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 CD84Q9UIB8 345 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 TRHDEQ9UKU6 1024 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 PADI4Q9UM07 663 aa11.34□□□□□ -0.59
IGHV4-28-201ENST00000390612 MGAQ8IWI9 3026 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 ADAMTS20P59510 1910 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 MACROD2A1Z1Q3 448 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 MIF4GDA9UHW6 222 aaKnown RBP11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 NOBOXO60393 691 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 PMPCBO75439 489 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 MT-CO3P00414 261 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 RBL1P28749 1068 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 POLD2P49005 469 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 RPIAP49247 311 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 WNT3AP56704 352 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 DCDC1P59894 354 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 RTP5Q14D33 572 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms