RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 BAG5Q9UL15 447 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 FZD10Q9ULW2 581 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 NOBOXO60393 691 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 NADKO95544 446 aaPredicted RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 LDLRP01130 860 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 WARSP23381 471 aaKnown RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 SERPINB1P30740 379 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 GSSP48637 474 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TIGD2Q4W5G0 525 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 KIAA0319Q5VV43 1072 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TMEM236Q5W0B7 351 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 ESRP1Q6NXG1 681 aaKnown RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 ZC3HC1Q86WB0 502 aaKnown RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 TRUB1Q8WWH5 349 aaKnown RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 ZNF560Q96MR9 790 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 ALG9Q9H6U8 611 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 ADAM28Q9UKQ2 775 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 PSME2Q9UL46 239 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 H0Y858 1186 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 KPNA6O60684 536 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 SULT1C4O75897 302 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 DCKP27707 260 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TTKP33981 857 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 CRYBB1P53674 252 aaPredicted RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 RAB10P61026 200 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
SDC1-202ENST00000381150 CCL14Q16627 93 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 BROXQ5VW32 411 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 R3HCC1LQ7Z5L2 792 aaKnown RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 CTU1Q7Z7A3 348 aaKnown RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 DCBLD1Q8N8Z6 715 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 ZFP90Q8TF47 636 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TPK1Q9H3S4 243 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 HMG20AQ9NP66 347 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 SLC2A6Q9UGQ3 507 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TSR3Q9UJK0 312 aaKnown RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 MTF2Q9Y483 593 aaPredicted RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 DFFAO00273 331 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 PPP6CO00743 305 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 GABRDO14764 452 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 ARPC2O15144 300 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TOMM70O94826 608 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 PGK1P00558 417 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 RFTN1Q14699 578 aaPredicted RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 SLC25A52Q3SY17 297 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 SLC22A16Q86VW1 577 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 KCTD14Q9BQ13 255 aaPredicted RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 OSBPL2Q9H1P3 480 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 UTP6Q9NYH9 597 aaKnown RBP13.83□□□□□ -0.2
SDC1-202ENST00000381150 AASSQ9UDR5 926 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 NDUFAF1Q9Y375 327 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TRAF6Q9Y4K3 522 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 U3KQV3 271 aa13.83□□□□□ -0.2
SDC1-202ENST00000381150 TRIM24O15164 1050 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 PFDN6O15212 129 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 LINC00032P0C843 101 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 BMP2P12643 396 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 BEX3Q00994 111 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 HERC3Q15034 1050 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 MEP1AQ16819 746 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 SLC36A3Q495N2 470 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 TBPL2Q6SJ96 375 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 OR6P1Q8NGX9 317 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 ZNF420Q8TAQ5 688 aaPredicted RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 STYXQ8WUJ0 223 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 DACH2Q96NX9 599 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 IL12RB2Q99665 862 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 DDX28Q9NUL7 540 aaKnown RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 TRPM7Q96QT4 1865 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 CLDN5O00501 218 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 DLGAP1O14490 977 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 ERCC2P18074 760 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 PTPN3P26045 913 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 NDUFV1P49821 464 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 NAB1Q13506 487 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 MAPRE1Q15691 268 aaKnown RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 SV2CQ496J9 727 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 RBM20Q5T481 1227 aaKnown RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 FAM117BQ6P1L5 589 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 OR52K2Q8NGK3 314 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 ALPK1Q96QP1 1244 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 NPY6RQ99463 290 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 NANOGQ9H9S0 305 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 CCM2LQ9NUG4 571 aaPredicted RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 MEIS3P2A8K0S8 358 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FAM72CH0Y354 149 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms