RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FAM71BQ8TC56 605 aa16.81■□□□□ 0.28
SMN2-201ENST00000380741 SYN2Q92777 582 aaPredicted RBP16.81■□□□□ 0.28
SMN2-201ENST00000380741 USP7Q93009 1102 aa16.81■□□□□ 0.28
SMN2-201ENST00000380741 MED8Q96G25 268 aa16.81■□□□□ 0.28
SMN2-201ENST00000380741 NUDT22Q9BRQ3 303 aa16.81■□□□□ 0.28
SMN2-201ENST00000380741 FOXJ2Q9P0K8 574 aa16.81■□□□□ 0.28
SMN2-201ENST00000380741 RCOR3Q9P2K3 495 aaPredicted RBP16.81■□□□□ 0.28
SMN2-201ENST00000380741 C9orf172C9J069 976 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 SERPING1P05155 500 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 CYP1A2P05177 515 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 IVLP07476 585 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 ADCY8P40145 1251 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
SMN2-201ENST00000380741 GPR1P46091 355 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 ITKQ08881 620 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 GALNT2Q10471 571 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 IHHQ14623 411 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 ZNF574Q6ZN55 896 aaPredicted RBP16.8■□□□□ 0.28
SMN2-201ENST00000380741 USP53Q70EK8 1073 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 LRRC49Q8IUZ0 686 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 NAGSQ8N159 534 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMN2-201ENST00000380741 SCAMP4Q969E2 229 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 AP2M1Q96CW1 435 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 POLR1EQ9GZS1 481 aaKnown RBP16.8■□□□□ 0.28
SMN2-201ENST00000380741 ABCG8Q9H221 673 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 PLEKHM1Q9Y4G2 1056 aa16.8■□□□□ 0.28
SMN2-201ENST00000380741 SDK2Q58EX2 2172 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 A0A0J9YYE9 177 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 MYO1FO00160 1098 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 MAP3K6O95382 1288 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 TRBC1P01850 177 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 KRT10P13645 584 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 CD1CP29017 333 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 GJC1P36383 396 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 ACTR1BP42025 376 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 SSR1P43307 286 aaKnown RBP16.79■□□□□ 0.28
SMN2-201ENST00000380741 ARSEP51690 589 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 ACTR1AP61163 376 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 FANCCQ00597 558 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 PTSQ03393 145 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 BIRC2Q13490 618 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 ATP13A4Q4VNC1 1196 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 NCBP2-AS2Q69YL0 99 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 ALG1LQ6GMV1 187 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 ADAMTSL4Q6UY14 1074 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 TRIM74Q86UV6 250 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 VASH2Q86V25 355 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 LUZP1Q86V48 1076 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 CPNE8Q86YQ8 564 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 NDUFAF2Q8N183 169 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 RCBTB1Q8NDN9 531 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 CPLX3Q8WVH0 158 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 MAML1Q92585 1016 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 SGF29Q96ES7 293 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 SCARF2Q96GP6 870 aaPredicted RBP16.79■□□□□ 0.28
SMN2-201ENST00000380741 AGAP2Q99490 1192 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 CDH19Q9H159 772 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 CBX8Q9HC52 389 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 TMEM98Q9Y2Y6 226 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 TTLL3Q9Y4R7 772 aa16.79■□□□□ 0.28
SMN2-201ENST00000380741 IGHV5-10-1A0A0J9YXX1 117 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 B8ZZF3 427 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 J3QKU1 62 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 PPM1DO15297 605 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 CCL4P13236 92 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 ZNF30P17039 623 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 GPR3P46089 330 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 ZBED6P86452 979 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 DSC2Q02487 901 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 PEX6Q13608 980 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 PAFAH1B3Q15102 231 aaKnown RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 CLPPQ16740 277 aaPredicted RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 MANEAQ5SRI9 462 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 ALKBH5Q6P6C2 394 aaKnown RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 ZNF765Q7L2R6 523 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 DTX1Q86Y01 620 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 ZNF564Q8TBZ8 553 aaPredicted RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 CCDC74BQ96LY2 380 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 OR2M4Q96R27 311 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 TDRD1Q9BXT4 1180 aaKnown RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 AKAP7Q9P0M2 348 aaPredicted RBP16.78■□□□□ 0.28
SMN2-201ENST00000380741 SEPT10Q9P0V9 454 aa16.78■□□□□ 0.28
SMN2-201ENST00000380741 HGSO14964 777 aaPredicted RBP16.77■□□□□ 0.28
SMN2-201ENST00000380741 MATN3O15232 486 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 ZW10O43264 779 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 STC1P52823 247 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 EPHB1P54762 984 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 UBASH3AP57075 661 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 PYCR3Q53H96 274 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 ANKRD20A8PQ5CZ79 823 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.28
SMN2-201ENST00000380741 TIGD7Q6NT04 549 aaPredicted RBP16.77■□□□□ 0.28
SMN2-201ENST00000380741 MARK2Q7KZI7 788 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms