RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 MINDY1Q8N5J2 469 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 BRSK1Q8TDC3 778 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS16-203ENST00000380469 TUBGCP3Q96CW5 907 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS16-203ENST00000380469 RPRD1AQ96P16 312 aaPredicted RBP16.29■□□□□ 0.2
VPS16-203ENST00000380469 DNAH12Q6ZR08 3092 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 KLHL33A6NCF5 533 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 H3BNH8 94 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 H3BSA7 217 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 PPP6CO00743 305 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 NME4O00746 187 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 VPS4BO75351 444 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 CRCPO75575 148 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ZNF23P17027 643 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ATP6V1B2P21281 511 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ATP6V0D1P61421 351 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 TIAL1Q01085 375 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS16-203ENST00000380469 BNIP2Q12982 314 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 GRB7Q14451 532 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 PTPRCAPQ14761 206 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
VPS16-203ENST00000380469 TBCELQ5QJ74 424 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 TRPC4APQ8TEL6 797 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 RMND5BQ96G75 393 aaPredicted RBP16.29■□□□□ 0.2
VPS16-203ENST00000380469 SYTL2Q9HCH5 934 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 ABCD2Q9UBJ2 740 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 AURKCQ9UQB9 309 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 DOCK4Q8N1I0 1966 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
VPS16-203ENST00000380469 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 MATN4O95460 622 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 EPOP01588 193 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 IGHA2P01877 340 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 CKMT2P17540 419 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 OGNP20774 298 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 OR1E1P30953 314 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 GRK4P32298 578 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 LRRC23Q53EV4 343 aaPredicted RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 MIB1Q86YT6 1006 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 PACRGLQ8N7B6 248 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 ANKRD60Q9BZ19 345 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 DDX18Q9NVP1 670 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 PTGDR2Q9Y5Y4 395 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 CEPT1Q9Y6K0 416 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 DHRS12A0PJE2 317 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 LRRC14BA6NHZ5 514 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 SUPT3HB4E1H0 165 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 CLASP2O75122 1294 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 SUPT3HO75486 399 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 OAZ2O95190 189 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 TBX18O95935 607 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 HMBSP08397 361 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 LINC00032P0C843 101 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 MTHFD2P13995 350 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 HSD17B1P14061 328 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 HGFP14210 728 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 IDO1P14902 403 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 FOXA1P55317 472 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 YBEYP58557 167 aaPredicted RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 GALNT3Q14435 633 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 SEMA3AQ14563 771 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 CAMK1DQ8IU85 385 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 SLC15A3Q8IY34 581 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 OR13C4Q8NGS5 318 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 STAG3L4Q8TBR4 150 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 ATOH8Q96SQ7 321 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 CLK4Q9HAZ1 481 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 OLA1Q9NTK5 396 aaKnown RBP16.28■□□□□ 0.2
VPS16-203ENST00000380469 GIMAP2Q9UG22 337 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 RNF112Q9ULX5 631 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
VPS16-203ENST00000380469 FAM155AB1AL88 458 aaPredicted RBP16.27■□□□□ 0.2
VPS16-203ENST00000380469 PDLIM1O00151 329 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 SOCS2O14508 198 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 GJB3O75712 270 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 CAPN3P20807 821 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 PSMA4P25789 261 aaKnown RBP16.27■□□□□ 0.2
VPS16-203ENST00000380469 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.2
VPS16-203ENST00000380469 CLCQ05315 142 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 LCP2Q13094 533 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 NHSL2Q5HYW2 709 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 IL31Q6EBC2 164 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 CIR1Q86X95 450 aaPredicted RBP16.27■□□□□ 0.2
VPS16-203ENST00000380469 SPPL2CQ8IUH8 684 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 FBXO39Q8N4B4 442 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 GOLM1Q8NBJ4 401 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 NSUN5Q96P11 429 aaKnown RBP16.27■□□□□ 0.2
VPS16-203ENST00000380469 KCNA7Q96RP8 456 aa16.27■□□□□ 0.2
VPS16-203ENST00000380469 CCDC68Q9H2F9 335 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms