RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NAT16Q8N8M0 369 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 OTUB2Q96DC9 234 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 LRRC3BQ96PB8 259 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ILKAPQ9H0C8 392 aaPredicted RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 CDH19Q9H159 772 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 STN1Q9H668 368 aaKnown RBP19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ZFYVE1Q9HBF4 777 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 POPDC3Q9HBV1 291 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 ARL8BQ9NVJ2 186 aa19.8■□□□□ 0.76
PDLIM5-205ENST00000380180 RASSF9O75901 435 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 NQO1P15559 274 aaKnown RBP19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 HNF1BP35680 557 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 TTPAP49638 278 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 IDH3AP50213 366 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 ASPHQ12797 758 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 PDAP1Q13442 181 aaKnown RBP19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 TUBB3Q13509 450 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 AGR3Q8TD06 166 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 BIRC8Q96P09 236 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 CCDC68Q9H2F9 335 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 ARMCX1Q9P291 453 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 FAM50BQ9Y247 325 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 MED16Q9Y2X0 877 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 PIKFYVEQ9Y2I7 2098 aa19.79■□□□□ 0.76
PDLIM5-205ENST00000380180 C1orf232A0A0U1RR37 186 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TRIM24O15164 1050 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 OR1I1O60431 355 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 RHOBTB1O94844 696 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF37AP17032 561 aaPredicted RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 PBX2P40425 430 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 KCNC1P48547 511 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 DNAJB13P59910 316 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 SULT2A1Q06520 285 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CDKN3Q16667 212 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 PTPRNQ16849 979 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 SETMARQ53H47 684 aaPredicted RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 VWA5B1Q5TIE3 1220 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TMC5Q6UXY8 1006 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CCNYL1Q8N7R7 359 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF557Q8N988 423 aaPredicted RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC7A6OSQ96CW6 309 aaPredicted RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 ALG9Q9H6U8 611 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 DNAJC28Q9NX36 388 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TAS2R13Q9NYV9 303 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 MARK1Q9P0L2 795 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 VPS9D1Q9Y2B5 631 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 RAP2CQ9Y3L5 183 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 RANBP2P49792 3224 aaKnown RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 ZBTB14O43829 449 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CCDC22O60826 627 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CLDN7O95471 211 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CD1DP15813 335 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 KCNA5P22460 613 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 MPSTP25325 297 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TMEM215Q68D42 235 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 DPY19L3Q6ZPD9 716 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TRIM67Q6ZTA4 783 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 TAS2R42Q7RTR8 314 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 LSMEM2Q8N112 164 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CELF5Q8N6W0 485 aaKnown RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 MYLIPQ8WY64 445 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 CEP44Q9C0F1 390 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 COG4Q9H9E3 785 aa19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 APOBEC2Q9Y235 224 aaKnown RBP19.78■□□□□ 0.76
PDLIM5-205ENST00000380180 A8MX80 341 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC9A3R1O14745 358 aaPredicted RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 PFDN6O15212 129 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 GPR39O43194 453 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 ATP5BP06576 529 aaKnown RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 SERPINA6P08185 405 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 SP100P23497 879 aaPredicted RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 NRIP1P48552 1158 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CCNHP51946 323 aaPredicted RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 ALDH18A1P54886 795 aaKnown RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 DMC1Q14565 340 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 KRT72Q14CN4 511 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CARD16Q5EG05 197 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 FAM91A1Q658Y4 838 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 PCDH20Q8N6Y1 951 aaKnown RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 PTERQ96BW5 349 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CCDC126Q96EE4 140 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 NSL1Q96IY1 281 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 TUBGCP5Q96RT8 1024 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 TUBB6Q9BUF5 446 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CPEB1Q9BZB8 566 aaKnown RBP19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 LRMDAQ9H2I8 198 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 SUV39H2Q9H5I1 410 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CYP4F12Q9HCS2 524 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 NCKIPSDQ9NZQ3 722 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 SLC30A1Q9Y6M5 507 aa19.77■□□□□ 0.76
PDLIM5-205ENST00000380180 CAPN8A6NHC0 703 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 A8MT66 165 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 IPO13O94829 963 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 POP4O95707 220 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 RASSF2P50749 326 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 RPL14P50914 215 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 CACNG1Q06432 222 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 AARS2Q5JTZ9 985 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms