RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 GDI2P50395 445 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 DSC1Q08554 894 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 SPANXN2Q5MJ10 180 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 SAMD4BQ5PRF9 694 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 CDH26Q8IXH8 852 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 ZNF444Q8N0Y2 327 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 SYNE4Q8N205 404 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 AGBL3Q8NEM8 1001 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 OR10T2Q8NGX3 314 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 GTF3C2Q8WUA4 911 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC22A17Q8WUG5 538 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 FAF2Q96CS3 445 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 KIFC3Q9BVG8 833 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 ILKAPQ9H0C8 392 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 RANBP3Q9H6Z4 567 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 CCM2LQ9NUG4 571 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 ZNF358Q9NW07 568 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 ERVK13-1Q9NX77 482 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 OPTCQ9UBM4 332 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 OGDHLQ9ULD0 1010 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 SPATA2Q9UM82 520 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 MFHAS1Q9Y4C4 1052 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 TEX264Q9Y6I9 313 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 U3KQV3 271 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 PKD1L3Q7Z443 1732 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 NWD1Q149M9 1564 aa8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 MN1Q10571 1320 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-201ENST00000379599 ATP6AP2A0A1C7CYW4 349 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 POLRMTO00411 1230 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 CYP7B1O75881 506 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FAM13AO94988 1023 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 JUNP05412 331 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ADORA3P0DMS8 318 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FSHRP23945 695 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 MAP2K4P45985 399 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 UBXN2AP68543 259 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 GPR50Q13585 617 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 GRM4Q14833 912 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SETMARQ53H47 684 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 PPM1JQ5JR12 505 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 PLA2G4FQ68DD2 849 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TRMT10BQ6PF06 316 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 DRICH1Q6PGQ1 229 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SCUBE3Q8IX30 993 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FAM71AQ8IYT1 594 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TEX47Q8TBZ9 253 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ZNF668Q96K58 619 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 NAT9Q9BTE0 207 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 MMP27Q9H306 513 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 GREM2Q9H772 168 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ZBTB26Q9HCK0 441 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 EXD2Q9NVH0 621 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ASNSD1Q9NWL6 643 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 CDYLQ9Y232 598 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 PCDHB12Q9Y5F1 795 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 KIF13BQ9NQT8 1826 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SMLR1H3BR10 107 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 WWP2O00308 870 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TPP1O14773 563 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC22A5O76082 557 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SRP72O76094 671 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 HTR1AP08908 422 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 AGXTP21549 392 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 CSTF2P33240 577 aaKnown RBP eCLIP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 MAP2K6P52564 334 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SLC12A3P55017 1021 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ADARB1P78563 741 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 STX5Q13190 355 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FAXCQ5TGI0 409 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 LIN9Q5TKA1 542 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 KIAA1958Q8N8K9 716 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 OR52H1Q8NGJ2 320 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 LMO3Q8TAP4 145 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 COA7Q96BR5 231 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 SGTBQ96EQ0 304 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 BCL2L14Q9BZR8 327 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TMEM168Q9H0V1 697 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ABCG4Q9H172 646 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TM9SF3Q9HD45 589 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ING3Q9NXR8 418 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 CCDC167Q9P0B6 97 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 TMEM181Q9P2C4 612 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 PRELID3BQ9Y3B1 194 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 FIS1Q9Y3D6 152 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 COPG1Q9Y678 874 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 MYH9P35579 1960 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 A0A1B0GUL6 1792 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 ZNF142P52746 1687 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 EFCAB9A8MZ26 197 aa8.49□□□□□ -1.05
NHLRC3-201ENST00000379599 LOC110117498-PIK3R3F6TDL0 507 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms