RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TMCO1Q9UM00 188 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 SPO11Q9Y5K1 396 aa10.46□□□□□ -0.74
POLR2J3-201ENST00000379340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 RGSL1A5PLK6 1076 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ANKRD66B4E2M5 251 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CCL22O00626 93 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ZBTB14O43829 449 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 LILRB3O75022 631 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 FKBP6O75344 327 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 NDUFS3O75489 264 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CA3P07451 260 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CTSAP10619 480 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF37AP17032 561 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 HDCP19113 662 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SP100P23497 879 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 PIK3R1P27986 724 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CDC25CP30307 473 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CSNK1DP48730 415 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CLCN4P51793 760 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 PGGT1BP53609 377 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 INHBCP55103 352 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ACTR3P61158 418 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 RPL26P61254 145 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 RHOAP61586 193 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 DEFB103AP81534 67 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC7A9P82251 487 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 BTKQ06187 659 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CDH18Q13634 790 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 MPP7Q5T2T1 576 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 RETSATQ6NUM9 610 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF549Q6P9A3 640 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 AAGABQ6PD74 315 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 C16orf89Q6UX73 402 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ISCA2Q86U28 154 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 LDB1Q86U70 411 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 STK40Q8N2I9 435 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SPATA6LQ8N4H0 392 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 NKAPQ8N5F7 415 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 LPCAT1Q8NF37 534 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 MDGA1Q8NFP4 955 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 OR4K2Q8NGD2 314 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 AGR3Q8TD06 166 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ANKRD49Q8WVL7 239 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 LPGAT1Q92604 370 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 JADE3Q92613 823 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 WBP2Q969T9 261 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ACDQ96AP0 544 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SGF29Q96ES7 293 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 FEM1AQ9BSK4 669 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 NUF2Q9BZD4 464 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 DERL2Q9GZP9 239 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ZBP1Q9H171 429 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SUDS3Q9H7L9 328 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF334Q9HCZ1 680 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 GTSE1Q9NYZ3 720 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 NKX1-2Q9UD57 310 aaPredicted RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 MCM8Q9UJA3 840 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 VPS28Q9UK41 221 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ANGPTL2Q9UKU9 493 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 PRPF19Q9UMS4 504 aaKnown RBP10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CRYL1Q9Y2S2 319 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 OR51B4Q9Y5P0 310 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 ACTL7AQ9Y615 435 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 CPQQ9Y646 472 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC4A7Q9Y6M7 1214 aa10.45□□□□□ -0.74
POLR2J3-201ENST00000379340 A0A088AWK7 358 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 MEI4A8MW99 385 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 STX7O15400 261 aaKnown RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 TEX28O15482 410 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 GREM1O60565 184 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 VPS26AO75436 327 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 RHOBTB1O94844 696 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 CD160O95971 181 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC4A1P02730 911 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 LRG1P02750 347 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 POU3F3P20264 500 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 VHLP40337 213 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ADARP55265 1226 aaKnown RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 HERVK_113P63132 956 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC34A1Q06495 639 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SULT2A1Q06520 285 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 RAD51Q06609 339 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 TRAF2Q12933 501 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 CUL3Q13618 768 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SEMA3AQ14563 771 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 RCN1Q15293 331 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 MAPRE2Q15555 327 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 MPPE1Q53F39 396 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF678Q5SXM1 525 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 PGM2L1Q6PCE3 622 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 TMEM207Q6UWW9 146 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 HTR3DQ70Z44 454 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 CUZD1Q86UP6 607 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ELMOD1Q8N336 334 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms