RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LTA4HP09960 611 aaKnown RBP17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 CCDC166P0CW27 439 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 SUOXP51687 545 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 CORO7P57737 925 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 TSPAN33Q86UF1 283 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 PLPP6Q8IY26 295 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 LYSMD1Q96S90 227 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 TRPV4Q9HBA0 871 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 MID2Q9UJV3 735 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 PPIL1Q9Y3C6 166 aa17.31■□□□□ 0.36
THUMPD2-201ENST00000378727 UBA6A0AVT1 1052 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 A8MX80 341 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 TRIM13O60858 407 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 NDUFS3O75489 264 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 HOXB8P17481 243 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 FMO4P31512 558 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 SEMG2Q02383 582 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 ANKRD54Q6NXT1 300 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 CRLF3Q8IUI8 442 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 PPP2R3CQ969Q6 453 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 ZNF641Q96N77 438 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 BIRC8Q96P09 236 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 MRPL57Q9BQC6 102 aaKnown RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 CIPCQ9C0C6 399 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 MRPL46Q9H2W6 279 aaKnown RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 MARCOQ9UEW3 520 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC27A6Q9Y2P4 619 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 OR1I1O60431 355 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 DLX3O60479 287 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 UBOX5O94941 541 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC6A11P48066 632 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 ABCE1P61221 599 aaKnown RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 FAM83EQ2M2I3 478 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 SETMARQ53H47 684 aaPredicted RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 TECRLQ5HYJ1 363 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 TANGO2Q6ICL3 276 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 CRTC1Q6UUV9 634 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 GRIN3AQ8TCU5 1115 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 SCRN2Q96FV2 425 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 TMEM120AQ9BXJ8 343 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 MTG2Q9H4K7 406 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 NSUN3Q9H649 340 aaKnown RBP17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 OBP2AQ9NY56 170 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 NUMBLQ9Y6R0 609 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 COL4A3Q01955 1670 aa17.3■□□□□ 0.36
THUMPD2-201ENST00000378727 NFATC1O95644 943 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 KITP10721 976 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 CA5AP35218 305 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC26A3P40879 764 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 TTPAP49638 278 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 CACNG1Q06432 222 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 RAD51Q06609 339 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 AGAP9Q5VTM2 703 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 FAM151BQ6UXP7 276 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 FAM136AQ96C01 138 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 TIFAQ96CG3 184 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 MOCOSQ96EN8 888 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 MCCC1Q96RQ3 725 aaPredicted RBP17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 C19orf43Q9BQ61 176 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 GATA5Q9BWX5 397 aaPredicted RBP17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 HPS4Q9NQG7 708 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 PRDM4Q9UKN5 801 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 WASF2Q9Y6W5 498 aa17.29■□□□□ 0.36
THUMPD2-201ENST00000378727 SRP72O76094 671 aaKnown RBP17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 BPIP17213 487 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 VASPP50552 380 aaPredicted RBP17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 ARFIP2P53365 341 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 CCDC15Q0P6D6 951 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 LIPMQ5VYY2 423 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 VITQ6UXI7 678 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 GDPD4Q6W3E5 623 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 WFIKKN2Q8TEU8 576 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 NXPE3Q969Y0 559 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 KLHL32Q96NJ5 620 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 ECT2Q9H8V3 914 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 IL26Q9NPH9 171 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 ACSS2Q9NR19 701 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 CDH7Q9ULB5 785 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 DNAJC16Q9Y2G8 782 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 PRRT4C9JH25 899 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 ZNF37AP17032 561 aaPredicted RBP17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 LHCGRP22888 699 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 RECQLP46063 649 aaPredicted RBP17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 KPNA2P52292 529 aaKnown RBP17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 CTSL3PQ5NE16 218 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 SGF29Q96ES7 293 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 HEPHQ9BQS7 1158 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 MYLK2Q9H1R3 596 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 VPS9D1Q9Y2B5 631 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 SLC30A1Q9Y6M5 507 aa17.28■□□□□ 0.36
THUMPD2-201ENST00000378727 TMEM114B3SHH9 223 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms