RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SLC17A6Q9P2U8 582 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 NEDD8-MDP1E9PL57 170 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FFAR3O14843 346 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 GPR42O15529 346 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FGBP02675 491 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FSTL1Q12841 308 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FAM46CQ5VWP2 391 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 MPP5Q8N3R9 675 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 OR4K2Q8NGD2 314 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 ACTRT2Q8TDY3 377 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 UBE2E3Q969T4 207 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 GBA3Q9H227 469 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 TBC1D14Q9P2M4 693 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FETUBQ9UGM5 382 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 GTF2IRD1Q9UHL9 959 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 H7C0S8 307 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 HGFP14210 728 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 HPCAL1P37235 193 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 ARL13AQ5H913 290 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-201ENST00000378156 ATAD3BQ5T9A4 648 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FSTL4Q6MZW2 842 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 NXNL1Q96CM4 212 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 MYO19Q96H55 970 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 QRFPRQ96P65 431 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 TBCDQ9BTW9 1192 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 S100A14Q9HCY8 104 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 Q9Y3F1 56 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 PRMT5O14744 637 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-201ENST00000378156 BMP10O95393 424 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 ADH1CP00326 375 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 COX7A2P14406 83 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 LIMK2P53671 638 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FOLH1Q04609 750 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 TSNQ15631 228 aaKnown RBP15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FAM187BQ17R55 369 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 CCDC157Q569K6 752 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 CNSTQ6PJW8 725 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 GPRIN3Q6ZVF9 776 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 LINGO1Q96FE5 620 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 FUBP3Q96I24 572 aaKnown RBP eCLIP15.01□□□□□ -0.01
NPHP4-201ENST00000378156 TEPSINQ96N21 525 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 INVSQ9Y283 1065 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 AK5Q9Y6K8 562 aa15.01□□□□□ -0.01
NPHP4-201ENST00000378156 CXorf49A8MYA2 514 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 FGF19O95750 216 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 MAPK9P45984 424 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 MAPK10P53779 464 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 GNA12Q03113 381 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TYW3Q6IPR3 259 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 TXNDC11Q6PKC3 985 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 C8orf59Q8N0T1 100 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 DPP10Q8N608 796 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 WDR36Q8NI36 951 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 UTP15Q8TED0 518 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 SEC14L1Q92503 715 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 PPP3R2Q96LZ3 170 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 RTKNQ9BST9 563 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 SLC25A51Q9H1U9 297 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TLE6Q9H808 572 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 ZFYVE1Q9HBF4 777 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 FBXW11Q9UKB1 542 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 PRPF19Q9UMS4 504 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 SLC25A14O95258 325 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 HK2P52789 917 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TMEM63BQ5T3F8 832 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TAS1R3Q7RTX0 852 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 UNC5BQ8IZJ1 945 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 CLYBLQ8N0X4 340 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 AMER2Q8N7J2 671 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 NPLOC4Q8TAT6 608 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 PTCD2Q8WV60 388 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 SKA1Q96BD8 255 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 EBF4Q9BQW3 602 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 RERGLQ9H628 205 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 CDH22Q9UJ99 828 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 A0A1B0GVM2 712 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TCAF2A6NFQ2 919 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 TRAFD1O14545 582 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 MATN3O15232 486 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 OTCP00480 354 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 MPP1Q00013 466 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 SLC25A11Q02978 314 aaKnown RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 CRYGNQ8WXF5 182 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 GORASP1Q9BQQ3 440 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 SEZ6LQ9BYH1 1024 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 RNF39Q9H2S5 420 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 MTF2Q9Y483 593 aaPredicted RBP15□□□□□ -0.01
NPHP4-201ENST00000378156 RAI2Q9Y5P3 530 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 WASF2Q9Y6W5 498 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 LAMB4A4D0S4 1761 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 AZIN1O14977 448 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 GRM6O15303 877 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 HS6ST1O60243 411 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 CTSEP14091 401 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 CXCR2P25025 360 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 DLG2Q15700 870 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 GK5Q6ZS86 529 aa15□□□□□ -0.01
NPHP4-201ENST00000378156 PQLC1Q8N2U9 271 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms