RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 MARCH2Q9P0N8 246 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 ABCD2Q9UBJ2 740 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PRG3Q9Y2Y8 225 aaPredicted RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 ZNF839A8K0R7 811 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PLOD2O00469 737 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 AZIN1O14977 448 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PRAMEF11O60813 436 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 RPP40O75818 363 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 CHRM3P20309 590 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 GRIA3P42263 894 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 STC1P52823 247 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 NKX3-2P78367 333 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 KCNA10Q16322 511 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 NFE2Q16621 373 aaPredicted RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 PARP15Q460N3 678 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 FBXO48Q5FWF7 155 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 KANK2Q63ZY3 851 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 SLC15A3Q8IY34 581 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 DCP1BQ8IZD4 617 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 MYO1HQ8N1T3 1032 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 OR4L1Q8NH43 312 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 RHEBL1Q8TAI7 183 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 RIN3Q8TB24 985 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 BRSK1Q8TDC3 778 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PEX13Q92968 403 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 ZNF512Q96ME7 567 aaPredicted RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 IL1RL2Q9HB29 575 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 DUS2Q9NX74 493 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 PTTG2Q9NZH5 202 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 A0A0D9SEW6 157 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 NR5A2O00482 541 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CLASP2O75122 1294 aaKnown RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 EPOP01588 193 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 FGF1P05230 155 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 RPLP2P05387 115 aaKnown RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 NELFEP18615 380 aaKnown RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 HLA-DPA1P20036 260 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 STX1BP61266 288 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 ECT2LQ008S8 904 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TAF10Q12962 218 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TYSND1Q2T9J0 566 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 KIF19Q2TAC6 998 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
BEST1-201ENST00000378043 MRNIPQ6NTE8 343 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 OR2T34Q8NGX1 318 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 OR2T3Q8NH03 318 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TRPC4APQ8TEL6 797 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 MPP4Q96JB8 637 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 B3GALT6Q96L58 329 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TRIB3Q96RU7 358 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CRISPLD1Q9H336 500 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SDR39U1Q9NRG7 319 aaPredicted RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 CATSPERZQ9NTU4 200 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 OLAHQ9NV23 265 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SLC12A8A0AV02 714 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 ANKRD33BA6NCL7 494 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SOCS2O14508 198 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 LINC00032P0C843 101 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 OR1G1P47890 313 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 BTG3Q14201 252 aaPredicted RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 NHSL2Q5HYW2 709 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 C10orf120Q5SQS8 335 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CCSAPQ6IQ19 270 aaPredicted RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 PAQR3Q6TCH7 311 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 GLB1LQ6UWU2 654 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CFAP52Q8N1V2 620 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 PCYOX1LQ8NBM8 494 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 UPF1Q92900 1129 aaKnown RBP eCLIP10.9□□□□□ -0.66
BEST1-201ENST00000378043 FBXO32Q969P5 355 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SMIM14Q96QK8 99 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 OSBPL11Q9BXB4 747 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TRIM8Q9BZR9 551 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 TFB2MQ9H5Q4 396 aaKnown RBP10.9□□□□□ -0.66
BEST1-201ENST00000378043 POPDC3Q9HBV1 291 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 CMTM6Q9NX76 183 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 POLG2Q9UHN1 485 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 PADI4Q9UM07 663 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 BTRCQ9Y297 605 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 PCDHB5Q9Y5E4 795 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 SPO11Q9Y5K1 396 aa10.9□□□□□ -0.66
BEST1-201ENST00000378043 MANSC4A6NHS7 340 aaPredicted RBP10.89□□□□□ -0.67
BEST1-201ENST00000378043 BBIP1A8MTZ0 92 aa10.89□□□□□ -0.67
BEST1-201ENST00000378043 TMEM189-UBE2V1I3L0A0 370 aa10.89□□□□□ -0.67
BEST1-201ENST00000378043 DLGAP1O14490 977 aa10.89□□□□□ -0.67
BEST1-201ENST00000378043 HTRA2O43464 458 aaPredicted RBP10.89□□□□□ -0.67
BEST1-201ENST00000378043 BMP2P12643 396 aa10.89□□□□□ -0.67
BEST1-201ENST00000378043 SLC6A2P23975 617 aa10.89□□□□□ -0.67
BEST1-201ENST00000378043 HOXD9P28356 352 aaPredicted RBP10.89□□□□□ -0.67
BEST1-201ENST00000378043 PCSK6P29122 969 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms