RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 WDR26Q9H7D7 661 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PHPT1Q9NRX4 125 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 NEU2Q9Y3R4 380 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 C4orf47A7E2U8 309 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 USP12O75317 370 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 APRTP07741 180 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 GPR1P46091 355 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 CCT8P50990 548 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 BASP1P80723 227 aaKnown RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 CDH17Q12864 832 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 OLIG2Q13516 323 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 FZD2Q14332 565 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 SUZ12Q15022 739 aaKnown RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PDPK2PQ6A1A2 396 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 RAET1GQ6H3X3 334 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 ADAMTSL4Q6UY14 1074 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 SYDE1Q6ZW31 735 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PARGQ86W56 976 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 RIOK2Q9BVS4 552 aaKnown RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 IL17CQ9P0M4 197 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 CD84Q9UIB8 345 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 AURKAO14965 403 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 TPSB2P20231 275 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 LPOP22079 712 aaPredicted RBP13.19□□□□□ -0.3
CKAP2-202ENST00000378034 MAGEA6P43360 314 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 GPS1Q13098 491 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 TPSAB1Q15661 275 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 SCAMP4Q969E2 229 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 FUBP1Q96AE4 644 aaKnown RBP13.19□□□□□ -0.3
CKAP2-202ENST00000378034 WDR92Q96MX6 357 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 ZSCAN5AQ9BUG6 496 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 TM7SF3Q9NS93 570 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 OR1A2Q9Y585 309 aa13.19□□□□□ -0.3
CKAP2-202ENST00000378034 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
CKAP2-202ENST00000378034 K7ESM1 405 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TNFRSF10CO14798 259 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 SLC30A4O14863 429 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 CSF2P04141 144 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 BPIP17213 487 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 SARNPP82979 210 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TRAM1L1Q8N609 369 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 DNAAF3Q8N9W5 541 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 BTN2A2Q8WVV5 523 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TBATAQ96M53 351 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 H3BM21 787 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 SOD1P00441 154 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 SLC4A1P02730 911 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 BLKP51451 505 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 HNRNPKP61978 463 aaKnown RBP eCLIP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 CDK3Q00526 305 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TRIP13Q15645 432 aaPredicted RBP13.18□□□□□ -0.3
CKAP2-202ENST00000378034 DBX2Q6ZNG2 339 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 HEATR4Q86WZ0 1026 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 PELI3Q8N2H9 469 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 HIC2Q96JB3 615 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
CKAP2-202ENST00000378034 EPHA8P29322 1005 aaPredicted RBP13.17□□□□□ -0.3
CKAP2-202ENST00000378034 SPAM1P38567 509 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 HADHAP40939 763 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 EIF2B5Q13144 721 aaKnown RBP13.17□□□□□ -0.3
CKAP2-202ENST00000378034 PTK6Q13882 451 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 SHBQ15464 509 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 UAP1L1Q3KQV9 507 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 ENPP7Q6UWV6 458 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 ZNF572Q7Z3I7 529 aaPredicted RBP13.17□□□□□ -0.3
CKAP2-202ENST00000378034 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 RANBP9Q96S59 729 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 RTKNQ9BST9 563 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 SPATA16Q9BXB7 569 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 ARL5AQ9Y689 179 aa13.17□□□□□ -0.3
CKAP2-202ENST00000378034 LDB2O43679 373 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms