RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 RPS6KA2Q15349 733 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 PAGE3Q5JUK9 113 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 OTUD3Q5T2D3 398 aaPredicted RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 ZNF549Q6P9A3 640 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 KDELC1Q6UW63 502 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 KIAA0408Q6ZU52 694 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 TFAP2DQ7Z6R9 452 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 PACRGLQ8N7B6 248 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 TRPV3Q8NET8 790 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 SEPT8Q92599 483 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 SGCDQ92629 289 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 GAD1Q99259 594 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 PTBP2Q9UKA9 531 aaKnown RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 PCDHA9Q9Y5H5 950 aa17.97■□□□□ 0.47
GNE-201ENST00000377902 MAGED1Q9Y5V3 778 aaPredicted RBP17.97■□□□□ 0.47
GNE-201ENST00000377902 ASPDHA6ND91 283 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 ZBTB11O95625 1053 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 PRSS56P0CW18 603 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 HSD17B1P14061 328 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 GSK3BP49841 420 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SERPINH1P50454 418 aaKnown RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 ATP4BP51164 291 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 TIAL1Q01085 375 aaKnown RBP eCLIP17.96■□□□□ 0.47
GNE-201ENST00000377902 CBX3Q13185 183 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 POLD3Q15054 466 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 TGFBIQ15582 683 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 DUSP28Q4G0W2 176 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 ABRAXAS1Q6UWZ7 409 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SPRED1Q7Z699 444 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 ZC3H7AQ8IWR0 971 aaKnown RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 DHRSXQ8N5I4 330 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 SMARCD1Q96GM5 515 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 VPS50Q96JG6 964 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 ARMC7Q9H6L4 198 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SLC52A3Q9NQ40 469 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 RGS18Q9NS28 235 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 EVLQ9UI08 416 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 CDH7Q9ULB5 785 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 AZIN1O14977 448 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 WISP3O95389 354 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 CD1DP15813 335 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 DCKP27707 260 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 HMOX2P30519 316 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SLC10A7Q0GE19 358 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 TRAF2Q12933 501 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SLC14A2Q15849 920 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 PLA2G4EQ3MJ16 856 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 NAT16Q8N8M0 369 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 HASPINQ8TF76 798 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 NUDT8Q8WV74 236 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 CASP10Q92851 521 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 TMEM125Q96AQ2 219 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 DCPSQ96C86 337 aaKnown RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 MTG1Q9BT17 334 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 SEZ6LQ9BYH1 1024 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 PRKD2Q9BZL6 878 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 ALG2Q9H553 416 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 LTB4R2Q9NPC1 389 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SEMA4BQ9NPR2 832 aaPredicted RBP17.96■□□□□ 0.47
GNE-201ENST00000377902 MRGBPQ9NV56 204 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 KCNH4Q9UQ05 1017 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 SH3GLB1Q9Y371 365 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 CORINQ9Y5Q5 1042 aa17.96■□□□□ 0.47
GNE-201ENST00000377902 RRN3P2A6NIE6 340 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 BBIP1A8MTZ0 92 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 MTHFD2P13995 350 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 GJA5P36382 358 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 CAPGP40121 348 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 ATP1A4Q13733 1029 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 NFYCQ13952 458 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 ANKRD26P1Q6NSI1 321 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 PLEKHA8Q96JA3 519 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TBATAQ96M53 351 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 RTP3Q9BQQ7 232 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 SMPD3Q9NY59 655 aaPredicted RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 SMIM35A0A1B0GVV1 85 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TCRBV5S2A0A599 114 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 PIRTP0C851 137 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 FUT4P22083 530 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 PRDX3P30048 256 aaKnown RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 RFC2P35250 354 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 RPS9P46781 194 aaKnown RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 BMXP51813 675 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 LIPEQ05469 1076 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 ZNF33AQ06730 810 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TMEM214Q6NUQ4 689 aaKnown RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 CCDC117Q8IWD4 279 aaPredicted RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 LRRC43Q8N309 656 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 SLC30A3Q99726 388 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TRMOQ9BU70 441 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 NOL6Q9H6R4 1146 aaKnown RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 TBC1D23Q9NUY8 699 aa17.95■□□□□ 0.46
GNE-201ENST00000377902 OAS3Q9Y6K5 1087 aaKnown RBP17.95■□□□□ 0.46
GNE-201ENST00000377902 EEF1B2P24534 225 aaKnown RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 CCR1P32246 355 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms