RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 DEFB119Q8N690 84 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 OR13C4Q8NGS5 318 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 DTX3LQ8TDB6 740 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 EID2BQ96D98 161 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 DNAJC1Q96KC8 554 aaKnown RBP13.13□□□□□ -0.31
TIMP1-202ENST00000377017 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
TIMP1-202ENST00000377017 ZSCAN5AQ9BUG6 496 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 CHRAC1Q9NRG0 131 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
TIMP1-202ENST00000377017 CD84Q9UIB8 345 aa13.13□□□□□ -0.31
TIMP1-202ENST00000377017 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 CCDC78A2IDD5 438 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 GOLGA8CPA6NN73 597 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 H7C0S8 307 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TOR1BO14657 336 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 USP1O94782 785 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 PCCBP05166 539 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 GNSP15586 552 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ITGALP20701 1170 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 PSMA3P25788 255 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ELK3P41970 407 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 GPR1P46091 355 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TMPRSS15P98073 1019 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ACVR1Q04771 509 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ITGA9Q13797 1035 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 FGL2Q14314 439 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 STAT4Q14765 748 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 IRF4Q15306 451 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 WSCD2Q2TBF2 565 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 MSS51Q4VC12 460 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 HENMT1Q5T8I9 393 aaKnown RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 AFTPHQ6ULP2 937 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TMEM135Q86UB9 458 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TRAM1L1Q8N609 369 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TP53I13Q8NBR0 393 aaPredicted RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 GPR26Q8NDV2 337 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 GABPB2Q8TAK5 448 aaPredicted RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 DNASE2BQ8WZ79 361 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 PWWP2AQ96N64 755 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 SPATA16Q9BXB7 569 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 MIR1-1HGQ9H1L0 117 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 ABCG8Q9H221 673 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 SUSD2Q9UGT4 822 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 EIF2B4Q9UI10 523 aaKnown RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 FKBPLQ9UIM3 349 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 CHMP2BQ9UQN3 213 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 FNDC3AQ9Y2H6 1198 aaKnown RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 HS3ST3A1Q9Y663 406 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 TEX264Q9Y6I9 313 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 SLC30A1Q9Y6M5 507 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
TIMP1-202ENST00000377017 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
TIMP1-202ENST00000377017 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 MAGEC1O60732 1142 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 BANF1O75531 89 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 PRAMEF1O95521 474 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 NMBRP28336 390 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 TEAD1P28347 426 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 ECHS1P30084 290 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 MC4RP32245 332 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 RACK1P63244 317 aaKnown RBP13.11□□□□□ -0.31
TIMP1-202ENST00000377017 TCF15Q12870 199 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
TIMP1-202ENST00000377017 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 FAM151BQ6UXP7 276 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 RFLNAQ6ZTI6 216 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 RABEPKQ7Z6M1 372 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 ANKMY2Q8IV38 441 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 PALM2Q8IXS6 379 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
TIMP1-202ENST00000377017 FBXO36Q8NEA4 188 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 OR13J1Q8NGT2 312 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 OR6P1Q8NGX9 317 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 SCAMP4Q969E2 229 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 CENPTQ96BT3 561 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 ULK4Q96C45 1275 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 MFSD3Q96ES6 412 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 CDKN2AIPNLQ96HQ2 116 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 MYOCQ99972 504 aa13.11□□□□□ -0.31
TIMP1-202ENST00000377017 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms