RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF879B4DU55 563 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 UNC5CO95185 931 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TRBC1P01850 177 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 RPLP2P05387 115 aaKnown RBP13.69□□□□□ -0.22
COL4A1-201ENST00000375820 NT5EP21589 574 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CTSKP43235 329 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 BCAP31P51572 246 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ACLYP53396 1101 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CLEC6AQ6EIG7 209 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 OR2L5Q8NG80 312 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 FCRL2Q96LA5 508 aaPredicted RBP13.69□□□□□ -0.22
COL4A1-201ENST00000375820 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 AP4B1Q9Y6B7 739 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 A0A0J9YYE9 177 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 URADA6NGE7 173 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CXCL11O14625 94 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 GNB5O14775 395 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 MAGEB3O15480 346 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 DNTTP04053 509 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 NRLP54845 237 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 SEMG2Q02383 582 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 EVX2Q03828 476 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 C6orf52Q5T4I8 152 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TTC27Q6P3X3 843 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ADCY4Q8NFM4 1077 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 PGM2Q96G03 612 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CITED4Q96RK1 184 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TBC1D30Q9Y2I9 924 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 POU2F1P14859 743 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 IGFALSP35858 605 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 MXD1Q05195 221 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF613Q6PF04 617 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 OR10H5Q8NGA6 315 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ING5Q8WYH8 240 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF607Q96SK3 696 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 hCG_1818297A0A087WSY0 165 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 OR2AG2A6NM03 316 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 SLC22A3O75751 556 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 PRKAR1AP10644 381 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 OR1D2P34982 312 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 UGT1A5P35504 534 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 SLCO6A1Q86UG4 719 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 NRSN1Q8IZ57 195 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 DEPDC4Q8N2C3 294 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TMEM199Q8N511 208 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 CHST4Q8NCG5 386 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 PDP1Q9P0J1 537 aaPredicted RBP13.69□□□□□ -0.22
COL4A1-201ENST00000375820 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
COL4A1-201ENST00000375820 TCRBV9S1A1TA0A576 114 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 PGRMC2O15173 223 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SLC20A2Q08357 652 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF155Q12901 538 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 RIPK1Q13546 671 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 MYO19Q96H55 970 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 NMUR1Q9HB89 426 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ZNF214Q9UL59 606 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 RAP2CQ9Y3L5 183 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ADGRB3O60242 1522 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 FAM149AA5PLN7 773 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 RYKP34925 604 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 MTA1Q13330 715 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SULT1C3Q6IMI6 304 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 HJURPQ8NCD3 748 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 RSL24D1Q9UHA3 163 aaKnown RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 EVLQ9UI08 416 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SNX10Q9Y5X0 201 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 CEP170BQ9Y4F5 1589 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SERPINB7O75635 380 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 NADKO95544 446 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 IL17AQ16552 155 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 CCNYL2Q5T2Q4 361 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ADGRG6Q86SQ4 1221 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 C7orf57Q8NEG2 295 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 RAB21Q9UL25 225 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ING4Q9UNL4 249 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SLC27A6Q9Y2P4 619 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SLC9A3R1O14745 358 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-201ENST00000375820 PEX10O60683 326 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 SMU1Q2TAY7 513 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 PPM1JQ5JR12 505 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 ANKRD52Q8NB46 1076 aa13.68□□□□□ -0.22
COL4A1-201ENST00000375820 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms