RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IL1R2P27930 398 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.47
C9orf3-203ENST00000375315 SLC12A1Q13621 1099 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 INPP5AQ14642 412 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 PDK2Q15119 407 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 C15orf59Q2T9L4 293 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-203ENST00000375315 PMF1Q6P1K2 205 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 NAPRTQ6XQN6 538 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 OSTM1Q86WC4 334 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 CMASQ8NFW8 434 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-203ENST00000375315 STON2Q8WXE9 905 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 FAM149B1Q96BN6 582 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 SEZ6LQ9BYH1 1024 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 TRIM15Q9C019 465 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.47
C9orf3-203ENST00000375315 PRORSD1PA6NEY8 169 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 KCNU1A8MYU2 1149 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 LRCH4O75427 683 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 RASAL1O95294 804 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 AXLP30530 894 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 MAGEA6P43360 314 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 OR1G1P47890 313 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 PLA2G16P53816 162 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 P2RX3P56373 397 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 VAC14Q08AM6 782 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 TFDP2Q14188 446 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 ATP6AP1Q15904 470 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 PAGE2BQ5JRK9 111 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 NPNTQ6UXI9 565 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 UNC5BQ8IZJ1 945 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 TNS4Q8IZW8 715 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 ESX1Q8N693 406 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SLAIN1Q8ND83 568 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 HTRA1Q92743 480 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 HDAC11Q96DB2 347 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SENP8Q96LD8 212 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SLC39A3Q9BRY0 314 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 EMILIN2Q9BXX0 1053 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 NGRNQ9NPE2 291 aaKnown RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 CCM2LQ9NUG4 571 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 MID2Q9UJV3 735 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 ISPDA4D126 451 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 TOR1BO14657 336 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 MED7O43513 233 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 LSM8O95777 96 aaKnown RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 ATICP31939 592 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 CASP3P42574 277 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 NAB1Q13506 487 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 AQP6Q13520 282 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SELPLGQ14242 412 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SUZ12Q15022 739 aaKnown RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 KYAT1Q16773 422 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 DGUOKQ16854 277 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 CEP78Q5JTW2 689 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 LINC00523Q86TU6 105 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SCML4Q8N228 414 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 MFSD4AQ8N468 514 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 CENPNQ96H22 339 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 COQ7Q99807 217 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-203ENST00000375315 FKBP14Q9NWM8 211 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 GPSM3Q9Y4H4 160 aa12.14□□□□□ -0.47
C9orf3-203ENST00000375315 OR4Q2P0C623 313 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CYP2C18P33260 490 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 GPD2P43304 727 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 PRKAA1Q13131 559 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ZBTB6Q15916 424 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 GK5Q6ZS86 529 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 MPP5Q8N3R9 675 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 TP53INP1Q96A56 240 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ING2Q9H160 280 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 GPATCH2LQ9NWQ4 482 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 C16orf96A6NNT2 1141 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 M0R3G1 203 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 UGT2B11O75310 529 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 DAB1O75553 588 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CCNKO75909 580 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 NADKO95544 446 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 DLGAP3O95886 979 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CD4P01730 458 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 BMP4P12644 408 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CCL5P13501 91 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms