RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CRTC1Q6UUV9 634 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 UNQ6494/PRO21346Q6UXR6 183 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 C3orf62Q6ZUJ4 267 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 TSPAN33Q86UF1 283 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 HDDC3Q8N4P3 179 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 STYXQ8WUJ0 223 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 MRGPRX1Q96LB2 322 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 ZNF778Q96MU6 729 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 EPB41L4BQ9H329 900 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 SMOC1Q9H4F8 434 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 TREX1Q9NSU2 369 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 PKP3Q9Y446 797 aa17.5■□□□□ 0.39
PFDN6-201ENST00000374606 A0A0U1RQS6 177 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 ZCWPW2A0A1B0GU75 182 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 TCRBV9S1A1TA0A576 114 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 STX7O15400 261 aaKnown RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 CLDN7O95471 211 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 ACADMP11310 421 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 GABRG2P18507 467 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 HMGCLP35914 325 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 RALGDSQ12967 914 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 COL9A2Q14055 689 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 SKIDA1Q1XH10 827 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 AGBL4Q5VU57 503 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 KIAA0930Q6ICG6 404 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 TSTD1Q8NFU3 115 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 OR4K2Q8NGD2 314 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 OR13C4Q8NGS5 318 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 UHMK1Q8TAS1 419 aaKnown RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 HMGB4Q8WW32 186 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 ZC3H10Q96K80 434 aaKnown RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 PLAC1Q9HBJ0 212 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 NLE1Q9NVX2 485 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 FBXL12Q9NXK8 326 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 BCCIPQ9P287 314 aaKnown RBP eCLIP17.49■□□□□ 0.39
PFDN6-201ENST00000374606 SLC2A6Q9UGQ3 507 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 ITM2BQ9Y287 266 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 KCTD3Q9Y597 815 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 FAM169AQ9Y6X4 670 aa17.49■□□□□ 0.39
PFDN6-201ENST00000374606 ZNF106Q9H2Y7 1883 aaKnown RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 EML5Q05BV3 1969 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 NEMP1O14524 444 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 AREL1O15033 823 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 SLC7A4O43246 635 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 SPINT1O43278 529 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 ALDH1A2O94788 518 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 ELFN1P0C7U0 828 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 C7P10643 843 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 NOVA1P51513 510 aaKnown RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 PRAMEP78395 509 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 TMPRSS15P98073 1019 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 ACVR1Q04771 509 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 FRG1Q14331 258 aaKnown RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 SLC29A2Q14542 456 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 CASP8Q14790 479 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 CNGA3Q16281 694 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 CDKN3Q16667 212 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 LONRF1Q17RB8 773 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 ESRP1Q6NXG1 681 aaKnown RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 HDXQ7Z353 690 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 PGBD3Q8N328 593 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 OR13J1Q8NGT2 312 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 CERS2Q96G23 380 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 FCRL3Q96P31 734 aaPredicted RBP17.48■□□□□ 0.39
PFDN6-201ENST00000374606 EDEM2Q9BV94 578 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 SERGEFQ9UGK8 458 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 GGT7Q9UJ14 662 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 ZMIZ1Q9ULJ6 1067 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 FZD4Q9ULV1 537 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 NCKAP1Q9Y2A7 1128 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 IGF2RP11717 2491 aa17.48■□□□□ 0.39
PFDN6-201ENST00000374606 C1QTNF9BB2RNN3 333 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 C1SP09871 688 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 NUDT17P0C025 328 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 C1QTNF9P0C862 333 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 HADHAP40939 763 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 STC1P52823 247 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 PTPRCAPQ14761 206 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 SMAD1Q15797 465 aaKnown RBP17.47■□□□□ 0.39
PFDN6-201ENST00000374606 PLK5Q496M5 336 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 TCEAL6Q6IPX3 200 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 ANO7Q6IWH7 933 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 KCNMB4Q86W47 210 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 RASSF3Q86WH2 238 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 CAMKK1Q8N5S9 505 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 FBF1Q8TES7 1133 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 CDKL2Q92772 493 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 TCEAL3Q969E4 200 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 HHIPQ96QV1 700 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 C19orf43Q9BQ61 176 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
PFDN6-201ENST00000374606 FUT8Q9BYC5 575 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 ACSS3Q9H6R3 686 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
PFDN6-201ENST00000374606 C20orf96Q9NUD7 363 aaPredicted RBP17.47■□□□□ 0.39
PFDN6-201ENST00000374606 PKD2L2Q9NZM6 624 aa17.47■□□□□ 0.39
PFDN6-201ENST00000374606 IL17CQ9P0M4 197 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms