RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NRG4Q8WWG1 115 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 PLD4Q96BZ4 506 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 TTC1Q99614 292 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CLSTN3Q9BQT9 956 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 ALG9Q9H6U8 611 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 BATF3Q9NR55 127 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 CATSPERZQ9NTU4 200 aa12.09□□□□□ -0.47
HMGCL-202ENST00000374487 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
HMGCL-202ENST00000374487 MYLKQ15746 1914 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SLC22A2O15244 555 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 TSPAN3O60637 253 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 HOXB8P17481 243 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ADSLP30566 484 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 TMEM198Q66K66 360 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 PIM3Q86V86 326 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 FBXW8Q8N3Y1 598 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 RYBPQ8N488 228 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 GPR150Q8NGU9 434 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 CEP70Q8NHQ1 597 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF461Q8TAF7 563 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SLC22A17Q8WUG5 538 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 STON2Q8WXE9 905 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 FAR2Q96K12 515 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 MSLNLQ96KJ4 702 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 EXOC2Q96KP1 924 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 MUC3BQ9H195 1237 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 TCF20Q9UGU0 1960 aaKnown RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ILVBLA1L0T0 632 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 INSIG1O15503 277 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SKAP2O75563 359 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 STC2O76061 302 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SEC24AO95486 1093 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 KLKB1P03952 638 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 BMP1P13497 986 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ACADSP16219 412 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 CLCN4P51793 760 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 RFTN1Q14699 578 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 TCHHL1Q5QJ38 904 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ADGRF1Q5T601 910 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SYCE2Q6PIF2 218 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 TMEM207Q6UWW9 146 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 C16orf89Q6UX73 402 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 GLT6D1Q7Z4J2 308 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 HPS6Q86YV9 775 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 MAB21L3Q8N8X9 362 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 KYQ8NBH2 561 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 MARK4Q96L34 752 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 PRICKLE1Q96MT3 831 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 CORO1CQ9ULV4 474 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-202ENST00000374487 MIA3Q5JRA6 1907 aa12.08□□□□□ -0.48
HMGCL-202ENST00000374487 A0A1B0GVM2 712 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 UBA6A0AVT1 1052 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 TCAF2A6NFQ2 919 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 C2orf81A6NN90 581 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 SMIM24O75264 130 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 RFPL2O75678 378 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 SUPT7LO94864 414 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 HMGA1P17096 107 aaKnown RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 PDE12Q6L8Q7 609 aaKnown RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 AAGABQ6PD74 315 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 ISCA2Q86U28 154 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 EFCAB3Q8N7B9 438 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 CDKN2AIPNLQ96HQ2 116 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 TRIB3Q96RU7 358 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 SERPINI1Q99574 410 aa12.07□□□□□ -0.48
HMGCL-202ENST00000374487 AGO1Q9UL18 857 aaKnown RBP12.07□□□□□ -0.48
HMGCL-202ENST00000374487 TGM5O43548 720 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SORBS2O94875 1100 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 IMPDH1P20839 514 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CES1P23141 567 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 RGRP47804 291 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SGSHP51688 502 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 STC1P52823 247 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 BTKQ06187 659 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SULT2A1Q06520 285 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 NSUN2Q08J23 767 aaKnown RBP eCLIP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PLD1Q13393 1074 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 VEPH1Q14D04 833 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CMPK2Q5EBM0 449 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 RNF219Q5W0B1 726 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF549Q6P9A3 640 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 TMC5Q6UXY8 1006 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CUZD1Q86UP6 607 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms