RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 A0A0D9SEW6 157 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 DRGXA6NNA5 263 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PRRT4C9JH25 899 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TNFRSF10AO00220 468 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 MATN3O15232 486 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 MAGEC1O60732 1142 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 OR1E1P30953 314 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 SERPINB8P50452 374 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 LIMK2P53671 638 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 LMAN2Q12907 356 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TEDDM1Q5T9Z0 273 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TMEM215Q68D42 235 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 MBLAC2Q68D91 279 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 STRA8Q7Z7C7 330 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 APCDD1Q8J025 514 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 HIC2Q96JB3 615 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 C8orf33Q9H7E9 229 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 ARL8BQ9NVJ2 186 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PTTG2Q9NZH5 202 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PPARGC1AQ9UBK2 798 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 G3BP2Q9UN86 482 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 WDFY4Q6ZS81 3184 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 A0A1B0GVM2 712 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FAM170BA6NMN3 283 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 DFFAO00273 331 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FCHO1O14526 889 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PI15O43692 258 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 KAT7O95251 611 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PROCP04070 461 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 MPOP05164 745 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 DCNP07585 359 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 CSKP41240 450 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 CSE1LP55060 971 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 SESN3P58005 492 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 CCDC153Q494R4 210 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 CERCAMQ5T4B2 595 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 C16orf46Q6P387 395 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF852Q6ZMS4 543 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 PHTF2Q8N3S3 785 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FATE1Q969F0 183 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FCRL5Q96RD9 977 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 SNX15Q9NRS6 342 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 NSMCE4AQ9NXX6 385 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 FBXO10Q9UK96 956 aa14.29□□□□□ -0.12
HMGA1-203ENST00000374116 INTS6Q9UL03 887 aaKnown RBP14.29□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-203ENST00000374116 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 TIMM44O43615 452 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 ANXA9O76027 345 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 TOP3BO95985 862 aaKnown RBP14.28□□□□□ -0.12
HMGA1-203ENST00000374116 FGF3P11487 239 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-203ENST00000374116 GRK2P25098 689 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 HADHAP40939 763 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 CD151P48509 253 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 SCNN1BP51168 640 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 CDH4P55283 916 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 STARD6P59095 220 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-203ENST00000374116 FUT11Q495W5 492 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 C2orf27AQ580R0 203 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 TMEM196Q5HYL7 178 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 RNF219Q5W0B1 726 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-203ENST00000374116 GRAMD4Q6IC98 578 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 Q6ZS52 159 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 KCNMB4Q86W47 210 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 ECSITQ9BQ95 431 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 GPAMQ9HCL2 828 aa14.28□□□□□ -0.12
HMGA1-203ENST00000374116 USP34Q70CQ2 3546 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 TMEM221A6NGB7 291 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 K7EQS6 105 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 M0R296 226 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 AP1G1O43747 822 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 CLDN11O75508 207 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 PEX11BO96011 259 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 SERPINE1P05121 402 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 ESRRAP11474 423 aaPredicted RBP14.27□□□□□ -0.12
HMGA1-203ENST00000374116 RHOQP17081 205 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 GLDCP23378 1020 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.12
HMGA1-203ENST00000374116 AQP5P55064 265 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 IRX4P78413 519 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 XIAPP98170 497 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 PRKCQQ04759 706 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 PCLAFQ15004 111 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 TBCCQ15814 346 aa14.27□□□□□ -0.12
HMGA1-203ENST00000374116 HSP90AA5PQ58FG0 334 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms