RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CCL22O00626 93 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 IDH2P48735 452 aaKnown RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 TMC5Q6UXY8 1006 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 SLC35F5Q8WV83 523 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 NELL1Q92832 810 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 NTAN1Q96AB6 310 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 ZHX1-C8orf76Q96EF9 292 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 MIPEPQ99797 713 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 USP2O75604 605 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 AMER2Q8N7J2 671 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 SOCS4Q8WXH5 440 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 EPB41L1Q9H4G0 881 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 MT-ND1P03886 318 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 TUFMP49411 452 aaKnown RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 TRIP4Q15650 581 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 TIMM50Q3ZCQ8 353 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 SYPL2Q5VXT5 272 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 KRT73Q86Y46 540 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 SIX4Q9UIU6 781 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 THRBP10828 461 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 RHOQP17081 205 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 CNSTQ6PJW8 725 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 OFCC1Q8IZS5 231 aa17.38■□□□□ 0.37
PTPRU-202ENST00000373779 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-202ENST00000373779 MOXD2PA6NHM9 499 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ITGA7Q13683 1181 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 CDHR3Q6ZTQ4 885 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ZFAND2BQ8WV99 257 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ITCHQ96J02 903 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 SH3BGRLO75368 114 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ZNF37AP17032 561 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 RABGGTBP53611 331 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 SLC5A3P53794 718 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 IRF8Q02556 426 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PARP15Q460N3 678 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 DENND1CQ8IV53 801 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 WDTC1Q8N5D0 677 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 C19orf18Q8NEA5 215 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PSMA8Q8TAA3 256 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 NUAK2Q9H093 628 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ABCB10Q9NRK6 738 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ZDHHC2Q9UIJ5 367 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 IKZF3Q9UKT9 509 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 ARHGAP15Q53QZ3 475 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 GPR180Q86V85 440 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 REPS1Q96D71 796 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PAWRQ96IZ0 340 aaKnown RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 BTN2A3PQ96KV6 586 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 CCNB1IP1Q9NPC3 277 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 STX16-NPEPL1H3BU86 382 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 URODP06132 367 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PKMP14618 531 aaKnown RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 SERPINA4P29622 427 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 FGD3Q5JSP0 725 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 LUZP2Q86TE4 346 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 OR4K2Q8NGD2 314 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 MYDGFQ969H8 173 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 SAMHD1Q9Y3Z3 626 aaKnown RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 NEMP2A6NFY4 417 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 GSTM1P09488 218 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 CD52P31358 61 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 CAPGP40121 348 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PURAQ00577 322 aaKnown RBP17.37■□□□□ 0.37
PTPRU-202ENST00000373779 HM13Q8TCT9 377 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 STYXQ8WUJ0 223 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 PRRG3Q9BZD7 231 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 SELENONQ9NZV5 590 aa17.37■□□□□ 0.37
PTPRU-202ENST00000373779 INCA1Q0VD86 236 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 HSPA14Q0VDF9 509 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 SLCO6A1Q86UG4 719 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 FCRL5Q96RD9 977 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 GPR21Q99679 349 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 PKP2Q99959 881 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 USP29Q9HBJ7 922 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 SH3GLB1Q9Y371 365 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 MYBPHLA2RUH7 354 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 EFCAB10A6NFE3 127 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 H3BN98 237 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 NADKO95544 446 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 HOXB6P17509 224 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CES1P23141 567 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CLCNKBP51801 687 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 PDZK1Q5T2W1 519 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CRTC3Q6UUV7 619 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 RTL3Q8N8U3 475 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 COX4I2Q96KJ9 171 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 FANCEQ9HB96 536 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 PIGVQ9NUD9 493 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 MKS1Q9NXB0 559 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 STMN3Q9NZ72 180 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CIDEBQ9UHD4 219 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 MYH1P12882 1939 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 UBXN8O00124 270 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 MFN2O95140 757 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 UROSP10746 265 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms