RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 SP110Q9HB58 689 aa11.19□□□□□ -0.62
RPRD1B-201ENST00000373433 NCKIPSDQ9NZQ3 722 aa11.19□□□□□ -0.62
RPRD1B-201ENST00000373433 WARS2Q9UGM6 360 aaKnown RBP11.19□□□□□ -0.62
RPRD1B-201ENST00000373433 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
RPRD1B-201ENST00000373433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ZNF701M0R085 212 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 SULT1C4O75897 302 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 C2P06681 752 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 POLBP06746 335 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PGAM1P18669 254 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TMTC4Q5T4D3 741 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 FSTL4Q6MZW2 842 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ALKAL1Q6UXT8 129 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 DHFR2Q86XF0 187 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CNTD1Q8N815 330 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ACDQ96AP0 544 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 AGAP2Q99490 1192 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PAK6Q9NQU5 681 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TLK1Q9UKI8 766 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PCDHGA7Q9Y5G6 932 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 YJEFN3A6XGL0 299 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 GRID2O43424 1007 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 GMNNO75496 209 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 GALTP07902 379 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 IL4RP24394 825 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MERTKQ12866 999 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PRKAA1Q13131 559 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PLD1Q13393 1074 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TFAP2DQ7Z6R9 452 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ZNF420Q8TAQ5 688 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MRPS31Q92665 395 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TANKQ92844 425 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 RTP4Q96DX8 246 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 SGF29Q96ES7 293 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MCRS1Q96EZ8 462 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CELF6Q96J87 481 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TOX2Q96NM4 488 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 GPR62Q9BZJ7 368 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 KNTC1P50748 2209 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 PHGDHO43175 533 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 AQP9O43315 295 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TTKP33981 857 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 RECQLP46063 649 aaPredicted RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TBX4P57082 545 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ATP6V0D2Q8N8Y2 350 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 TMEM209Q96SK2 561 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MAGEB5Q9BZ81 275 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 ATXN3LQ9H3M9 355 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CATSPERBQ9H7T0 1116 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MRPL40Q9NQ50 206 aaKnown RBP11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
RPRD1B-201ENST00000373433 CXCL14O95715 111 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 MBL2P11226 248 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 PABPC1P11940 636 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 S100A1P23297 94 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 SLC7A2P52569 658 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 TWF1Q12792 350 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 TAF10Q12962 218 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 TRNP1Q6NT89 227 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 UTS2BQ765I0 119 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 TRUB1Q8WWH5 349 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 SERPINB11Q96P15 392 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 LGMNQ99538 433 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 SPAG4Q9NPE6 437 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 EGFL7Q9UHF1 273 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 IPO11Q9UI26 975 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 CASP8AP2Q9UKL3 1982 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 ANKRD12Q6UB98 2062 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 GPC4O75487 556 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 CAPNS1P04632 268 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 DCKP27707 260 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 CARTPTQ16568 116 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 PPP4R4Q6NUP7 873 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 PDZD8Q8NEN9 1154 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 CPNE1Q99829 537 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 TMA7Q9Y2S6 64 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 MRASO14807 208 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 SNAP91O60641 907 aa11.17□□□□□ -0.62
RPRD1B-201ENST00000373433 ALDH1A2O94788 518 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms