RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CNTN6Q9UQ52 1028 aa10.6□□□□□ -0.71
PGK1-201ENST00000373316 A0A1W2PPM1 405 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PER2O15055 1255 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PCNAP12004 261 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 POLR2EP19388 210 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 CTGFP29279 349 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ABRQ12979 859 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 LCP2Q13094 533 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PRKD1Q15139 912 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 ZCCHC23Q6ZST2 131 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 POU5F2Q8N7G0 328 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 C1orf127Q8N9H9 656 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SELENOMQ8WWX9 145 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ZNF558Q96NG5 402 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SLITRK2Q9H156 845 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 THUMPD1Q9NXG2 353 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 PADI4Q9UM07 663 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SIN3BO75182 1162 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SNAPC5O75971 98 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 EEFSECP57772 596 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 HECTD2Q5U5R9 776 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 GPR180Q86V85 440 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 FITM2Q8N6M3 262 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 RTL3Q8N8U3 475 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 CENPNQ96H22 339 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 GAD1Q99259 594 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ADAM2Q99965 735 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PTBP2Q9UKA9 531 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 AGO1Q9UL18 857 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 R3HDM2Q9Y2K5 976 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 PSMB9P28065 219 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ARMC4Q5T2S8 1044 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 OR7A2PQ8NGA2 310 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PYDC1Q8WXC3 89 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 RCN3Q96D15 328 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 MRPL45Q9BRJ2 306 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 NXF3Q9H4D5 531 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 ARHGEF4Q9NR80 690 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 SLC17A7Q9P2U7 560 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ENTPD4Q9Y227 616 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 NCF1BA6NI72 391 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 NCF1CA8MVU1 366 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 FAM47E-STBD1D6RA91 191 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 H0YJX3 145 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ESR1P03372 595 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 NCF1P14598 390 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 PKMP14618 531 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 INCA1Q0VD86 236 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PFKFB4Q16877 469 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 C10orf62Q5T681 223 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 TRIQKQ629K1 86 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 PPP4R4Q6NUP7 873 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 EIF3MQ7L2H7 374 aaKnown RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 AHI1Q8N157 1196 aa10.59□□□□□ -0.71
PGK1-201ENST00000373316 ST13P5Q8NFI4 369 aaPredicted RBP10.59□□□□□ -0.71
PGK1-201ENST00000373316 C1QTNF3-AMACRE9PGA6 284 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 SERPINB7O75635 380 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 IRF8Q02556 426 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 TRIM32Q13049 653 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 SLC9A4Q6AI14 798 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 UBR7Q8N806 425 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 DCAKDQ8WVC6 231 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 ZNF317Q96PQ6 595 aaPredicted RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 SLC38A2Q96QD8 506 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 GDAP2Q9NXN4 497 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 TBC1D14Q9P2M4 693 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 MYH9P35579 1960 aaKnown RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 SNAI1O95863 264 aaPredicted RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 IMPDH2P12268 514 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 GRIA3P42263 894 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 IKBKEQ14164 716 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 TSTD2Q5T7W7 516 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 SULT1C3Q6IMI6 304 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 ADGRG6Q86SQ4 1221 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 ZNF607Q96SK3 696 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 SEMA3CQ99985 751 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 OSBPL7Q9BZF2 842 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 EBF2Q9HAK2 575 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 PRR5-ARHGAP8B1AHC4 643 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 DNAJB5O75953 348 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 IL6P05231 212 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 AOC1P19801 751 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 PRKCHP24723 683 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 ACTR3P61158 418 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 ARHGAP8P85298 464 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 GHRHRQ02643 423 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 KCNJ11Q14654 390 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 STARD3Q14849 445 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 PAFAH1B3Q15102 231 aaKnown RBP10.58□□□□□ -0.72
PGK1-201ENST00000373316 MPPE1Q53F39 396 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 FAM46CQ5VWP2 391 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 C6orf89Q6UWU4 347 aa10.58□□□□□ -0.72
PGK1-201ENST00000373316 SPPL2AQ8TCT8 520 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms