RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 PLCL1Q15111 1095 aa16.55■□□□□ 0.24
PABPC4-203ENST00000372858 ANKRD26P1Q6NSI1 321 aa16.55■□□□□ 0.24
PABPC4-203ENST00000372858 CHST15Q7LFX5 561 aaPredicted RBP16.55■□□□□ 0.24
PABPC4-203ENST00000372858 TWIST2Q8WVJ9 160 aa16.55■□□□□ 0.24
PABPC4-203ENST00000372858 TRIM8Q9BZR9 551 aa16.55■□□□□ 0.24
PABPC4-203ENST00000372858 TMEM9Q9P0T7 183 aa16.55■□□□□ 0.24
PABPC4-203ENST00000372858 PPP6CO00743 305 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 CDK14O94921 469 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 GJA5P36382 358 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 CLCNKBP51801 687 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 CDKN2DP55273 166 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 OGFOD2Q6N063 350 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 NANOGP8Q6NSW7 305 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 OR6P1Q8NGX9 317 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TUBGCP3Q96CW5 907 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 SOX17Q9H6I2 414 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 DOLKQ9UPQ8 538 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 PCDHGA4Q9Y5G9 962 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TRIM64BA6NI03 449 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 AZIN1O14977 448 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 FGF10O15520 208 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 FGF4P08620 206 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 LBPP18428 481 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 BDNFP23560 247 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 MAP4P27816 1152 aaKnown RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 BMXP51813 675 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TRAF2Q12933 501 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 PDCD4Q53EL6 469 aaKnown RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 GRAMD4Q6IC98 578 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 FAM117BQ6P1L5 589 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 LDB1Q86U70 411 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 CILP2Q8IUL8 1156 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TBC1D21Q8IYX1 336 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 RYBPQ8N488 228 aaPredicted RBP16.54■□□□□ 0.24
PABPC4-203ENST00000372858 OR52K2Q8NGK3 314 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 MYLPFQ96A32 169 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 ASB2Q96Q27 587 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 GAD1Q99259 594 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 TUBA1CQ9BQE3 449 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 PFDN4Q9NQP4 134 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 PCDHA9Q9Y5H5 950 aa16.54■□□□□ 0.24
PABPC4-203ENST00000372858 FUOMA2VDF0 154 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PDHXO00330 501 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PAGE1O75459 146 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SNAP29O95721 258 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 LDLRP01130 860 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 THP07101 528 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 HGFP14210 728 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 ZNF182P17025 639 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SLC26A3P40879 764 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 GSK3BP49841 420 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 HLCSP50747 726 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TNK2Q07912 1038 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 GRSF1Q12849 480 aaKnown RBP eCLIP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SPIDRQ14159 915 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SPATS1Q496A3 300 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PTGR2Q8N8N7 351 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 ZFYVE28Q9HCC9 887 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 ANAPC2Q9UJX6 822 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PLXNB2O15031 1838 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 MATN4O95460 622 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 CCNA2P20248 432 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 EEF1B2P24534 225 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SOX11P35716 441 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 NFKB2Q00653 900 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 FOXM1Q08050 763 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 NFATC3Q12968 1075 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 NFYCQ13952 458 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 CENPSQ8N2Z9 138 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PNPT1Q8TCS8 783 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TANKQ92844 425 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 ACDQ96AP0 544 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 PTERQ96BW5 349 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 CNDP2Q96KP4 475 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 FCRL2Q96LA5 508 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 KCTD14Q9BQ13 255 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 MTG1Q9BT17 334 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TRIM62Q9BVG3 475 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TRIM54Q9BYV2 358 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 MUC13Q9H3R2 512 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 ALG2Q9H553 416 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 TMEM165Q9HC07 324 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 CSNK1G1Q9HCP0 422 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 INTS10Q9NVR2 710 aaKnown RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 SELENONQ9NZV5 590 aa16.53■□□□□ 0.24
PABPC4-203ENST00000372858 IFT80Q9P2H3 777 aaPredicted RBP16.53■□□□□ 0.24
PABPC4-203ENST00000372858 DYTNA2CJ06 578 aa16.52■□□□□ 0.24
PABPC4-203ENST00000372858 SIX3O95343 332 aaPredicted RBP16.52■□□□□ 0.24
PABPC4-203ENST00000372858 NCK1P16333 377 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms