RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TSPAN33Q86UF1 283 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 TRIM42Q8IWZ5 723 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 PNPLA1Q8N8W4 532 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF473Q8WTR7 871 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 OR8D1Q8WZ84 308 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 THAP10Q9P2Z0 257 aaPredicted RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 EMCNQ9ULC0 261 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 A8MX80 341 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 PPARGP37231 505 aaPredicted RBP26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 ELAVL3Q14576 367 aaKnown RBP26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 DBN1Q16643 649 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 C9orf64Q5T6V5 341 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 ZDHHC20Q5W0Z9 365 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 CERS6Q6ZMG9 384 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 TMIEQ8NEW7 156 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 MANSC1Q9H8J5 431 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 TMEM216Q9P0N5 145 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 B4GALT6Q9UBX8 382 aa26.22■■□□□ 1.79
ATPAF1-202ENST00000371937 UPK3BL1B0FP48 263 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 UPK3BL2E5RIL1 263 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 H3BQ06 376 aaPredicted RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 SRP72O76094 671 aaKnown RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PRSS56P0CW18 603 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF30P17039 623 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 XPAP23025 273 aaPredicted RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 SPAM1P38567 509 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 IRF9Q00978 393 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PSAPL1Q6NUJ1 521 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 C16orf46Q6P387 395 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 SFTPA1Q8IWL2 248 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 SUGP1Q8IWZ8 645 aaKnown RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PIANPQ8IYJ0 282 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PLD6Q8N2A8 252 aaKnown RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 LPGAT1Q92604 370 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PBXIP1Q96AQ6 731 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 TTC1Q99614 292 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 CCDC68Q9H2F9 335 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 SUN2Q9UH99 717 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PRAMEF1O95521 474 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 PROCP04070 461 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 APOA4P06727 396 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 HLA-EP13747 358 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 BPIP17213 487 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 ARHGEF7Q14155 803 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF771Q7L3S4 317 aaPredicted RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 TAS2R42Q7RTR8 314 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 TBC1D1Q86TI0 1168 aaPredicted RBP26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 TTC7BQ86TV6 843 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 STK40Q8N2I9 435 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 OLFM1Q99784 485 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 IL26Q9NPH9 171 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 TRIOBPQ9H2D6 2365 aa26.21■■□□□ 1.79
ATPAF1-202ENST00000371937 BRWD1Q9NSI6 2320 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 MUC22E2RYF6 1773 aaPredicted RBP26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 GLYATL1P3A0A0U1RQE8 302 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 UBA6A0AVT1 1052 aaPredicted RBP26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 BPGMP07738 259 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 TIMP2P16035 220 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 ITGALP20701 1170 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 LHCGRP22888 699 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 VIPR1P32241 457 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 CDKN1CP49918 316 aaPredicted RBP26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 PTSQ03393 145 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 TSNAXIP1Q2TAA8 658 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM151BQ6UXP7 276 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 SNX20Q7Z614 316 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 NUDCD3Q8IVD9 361 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM161BQ96MY7 647 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 C1QTNF1Q9BXJ1 281 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 FAM96AQ9H5X1 160 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 NMRAL1Q9HBL8 299 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 FGFR1OP2Q9NVK5 253 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF358Q9NW07 568 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 STARD13Q9Y3M8 1113 aa26.2■■□□□ 1.78
ATPAF1-202ENST00000371937 C16orf96A6NNT2 1141 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 CHRM1P11229 460 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 PTGER3P43115 390 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 IRX4P78413 519 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 GKAP1Q5VSY0 366 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF549Q6P9A3 640 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 RAB3IL1Q8TBN0 382 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 AARSD1Q9BTE6 412 aaKnown RBP26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 PITPNM3Q9BZ71 974 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 GPAMQ9HCL2 828 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 SIRPGQ9P1W8 387 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 MID2Q9UJV3 735 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 PPM1HQ9ULR3 514 aa26.19■■□□□ 1.78
ATPAF1-202ENST00000371937 KPNA3O00505 521 aaPredicted RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 KLF11O14901 512 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 KLHL2O95198 593 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 GMPRP36959 345 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 SLC26A3P40879 764 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 KPNA2P52292 529 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 ADARP55265 1226 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 SEMG2Q02383 582 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 NFATC2Q13469 925 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 ZNF460Q14592 562 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 GPR33Q49SQ1 333 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 LYPLAL1Q5VWZ2 237 aa26.18■■□□□ 1.78
ATPAF1-202ENST00000371937 DSG4Q86SJ6 1040 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms