RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MID1IP1Q9NPA3 183 aa28.86■■■□□ 2.21
SSBP3-204ENST00000371320 PITPNM1O00562 1244 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 FBP2O00757 339 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 CDK14O94921 469 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 CES1P23141 567 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 ATXN3P54252 364 aaPredicted RBP28.85■■■□□ 2.21
SSBP3-204ENST00000371320 LRP8Q14114 963 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 PAQR3Q6TCH7 311 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 ICA1LQ8NDH6 482 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 LPCAT1Q8NF37 534 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 C3orf30Q96M34 536 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 LRGUKQ96M69 825 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 TCF12Q99081 682 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 SLC25A23Q9BV35 468 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 DTNAQ9Y4J8 743 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 A0A1B0GVM2 712 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 LRRC14BA6NHZ5 514 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 ACOT8O14734 319 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 IRF1P10914 325 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 HMGA1P17096 107 aaKnown RBP28.85■■■□□ 2.21
SSBP3-204ENST00000371320 HDCP19113 662 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 MED21Q13503 144 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 GEN1Q17RS7 908 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 ADGRF1Q5T601 910 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 C16orf59Q7L2K0 433 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 STAG3L4Q8TBR4 150 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 KIAA1191Q96A73 305 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 DDX50Q9BQ39 737 aaKnown RBP28.85■■■□□ 2.21
SSBP3-204ENST00000371320 DERL2Q9GZP9 239 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 MUC3BQ9H195 1237 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 UNC93B1Q9H1C4 597 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 MRPL40Q9NQ50 206 aaKnown RBP28.85■■■□□ 2.21
SSBP3-204ENST00000371320 PDP2Q9P2J9 529 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 PCDHGC4Q9Y5F7 938 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 RAI2Q9Y5P3 530 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 DNAJC15Q9Y5T4 150 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 BACE2Q9Y5Z0 518 aa28.85■■■□□ 2.21
SSBP3-204ENST00000371320 PPP6CO00743 305 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 RNASEH1O60930 286 aaKnown RBP28.84■■■□□ 2.21
SSBP3-204ENST00000371320 SEC24AO95486 1093 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 FGF4P08620 206 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 ZCCHC18P0CG32 403 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 ATP4BP51164 291 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 STX1BP61266 288 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 RNF219Q5W0B1 726 aaPredicted RBP28.84■■■□□ 2.21
SSBP3-204ENST00000371320 FAM156AQ8NDB6 213 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 SMIM14Q96QK8 99 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 FBRSL1Q9HCM7 1045 aaKnown RBP28.84■■■□□ 2.21
SSBP3-204ENST00000371320 RNF112Q9ULX5 631 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 TET1Q8NFU7 2136 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 E7ENX8 843 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 KERAO60938 352 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 VCLP18206 1134 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 RAD51Q06609 339 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 KIAA1841Q6NSI8 718 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 SNX31Q8N9S9 440 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 SCLYQ96I15 445 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 TUBGCP5Q96RT8 1024 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 CWH43Q9H720 699 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 AKTIPQ9H8T0 292 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 TBC1D30Q9Y2I9 924 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 MED16Q9Y2X0 877 aa28.84■■■□□ 2.21
SSBP3-204ENST00000371320 SUPT3HB4E1H0 165 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 AZIN1O14977 448 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 SUPT3HO75486 399 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 LPOP22079 712 aaPredicted RBP28.83■■■□□ 2.21
SSBP3-204ENST00000371320 PSMD8P48556 350 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 SETMARQ53H47 684 aaPredicted RBP28.83■■■□□ 2.21
SSBP3-204ENST00000371320 CAPNS2Q96L46 248 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 YIPF3Q9GZM5 350 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 EPS15L1Q9UBC2 864 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 AFF4Q9UHB7 1163 aaKnown RBP28.83■■■□□ 2.21
SSBP3-204ENST00000371320 SARDHQ9UL12 918 aa28.83■■■□□ 2.21
SSBP3-204ENST00000371320 LCHNA4D1U4 455 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 F11P03951 625 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ADGRE1Q14246 886 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 RARS2Q5T160 578 aaKnown RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 PAOXQ6QHF9 649 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 SPATA24Q86W54 205 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 SLAIN1Q8ND83 568 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 TRPC4APQ8TEL6 797 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ASB9Q96DX5 294 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 NSUN5Q96P11 429 aaKnown RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 BTBD9Q96Q07 612 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ZBED2Q9BTP6 218 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ADGRE3Q9BY15 652 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 SEZ6LQ9BYH1 1024 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 RNF38Q9H0F5 515 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 CREBZFQ9NS37 354 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 SPATS2LQ9NUQ6 558 aaKnown RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 MRASO14807 208 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 NRP2O60462 931 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 CLASP2O75122 1294 aaKnown RBP28.82■■■□□ 2.2
SSBP3-204ENST00000371320 PSMA3P25788 255 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ACADVLP49748 655 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 ATP6V0D1P61421 351 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 TAF12Q16514 161 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 TMEM126BQ8IUX1 230 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 FBXO39Q8N4B4 442 aa28.82■■■□□ 2.2
SSBP3-204ENST00000371320 OR9I1Q8NGQ6 314 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms