RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PKN3Q6P5Z2 889 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 CATSPER4Q7RTX7 472 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 CTU1Q7Z7A3 348 aaKnown RBP9.65□□□□□ -0.86
LRRC40-201ENST00000370952 LINC00523Q86TU6 105 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 MIER2Q8N344 545 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 AFG1LQ8WV93 481 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 HTRA1Q92743 480 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 SDCCAG3Q96C92 435 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 BIRC7Q96CA5 298 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 HACD3Q9P035 362 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 SCHIP1Q9P0W5 487 aaPredicted RBP9.65□□□□□ -0.86
LRRC40-201ENST00000370952 ANKMY1Q9P2S6 941 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 PCDHGA11Q9Y5H2 935 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 PCDHA9Q9Y5H5 950 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.86
LRRC40-201ENST00000370952 SBF1O95248 1867 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 CCDC162PA2VCL2 907 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 ERI2A8K979 691 aaKnown RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 BBIP1A8MTZ0 92 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 SIX3O95343 332 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 EGFRP00533 1210 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 GSTM2P28161 218 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 CHRNA4P43681 627 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 DIO3P55073 304 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 FBXO48Q5FWF7 155 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 FKBP1CQ5VVH2 108 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 PRMT9Q6P2P2 845 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 THAP5Q7Z6K1 395 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 LDB1Q86U70 411 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 TBC1D21Q8IYX1 336 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 HS3ST5Q8IZT8 346 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 RYBPQ8N488 228 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 NDNFQ8TB73 568 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 TMBIM1Q969X1 311 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 C18orf25Q96B23 403 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 TUBGCP3Q96CW5 907 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 FICDQ9BVA6 458 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 WDR12Q9GZL7 423 aaKnown RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 NOL6Q9H6R4 1146 aaKnown RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 EPS8L2Q9H6S3 715 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 SMURF2Q9HAU4 748 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 NTN4Q9HB63 628 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 ZNF277Q9NRM2 450 aaPredicted RBP9.65□□□□□ -0.87
LRRC40-201ENST00000370952 MRGBPQ9NV56 204 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 FBXO5Q9UKT4 447 aa9.65□□□□□ -0.87
LRRC40-201ENST00000370952 A0A087X1B8 175 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 NOBOXO60393 691 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 VTNP04004 478 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 LINC00032P0C843 101 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 THRBP10828 461 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PTPRAP18433 802 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 FSHRP23945 695 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 KPNA2P52292 529 aaKnown RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 SH3BP2P78314 561 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 ADAM17P78536 824 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 CTF1Q16619 201 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 CTU2Q2VPK5 515 aaKnown RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PAGE3Q5JUK9 113 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PCID2Q5JVF3 399 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 ARHGAP36Q6ZRI8 547 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 SCML4Q8N228 414 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 FAM167AQ96KS9 214 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 TEX37Q96LM6 180 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 TEKT5Q96M29 485 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 TEPSINQ96N21 525 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 ZMAT2Q96NC0 199 aaKnown RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 TOR3AQ9H497 397 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PRMT7Q9NVM4 692 aaPredicted RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 KLHL3Q9UH77 587 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 ENPP5Q9UJA9 477 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PCDHB3Q9Y5E6 796 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 OAS3Q9Y6K5 1087 aaKnown RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 H0YAE9 185 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 CLDN5O00501 218 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 UGT2B4P06133 528 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 ALOX5P09917 674 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 CYP2C8P10632 490 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 HGFP14210 728 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 MAGP20916 626 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 PIGAP37287 484 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 OR4D2P58180 307 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 TNFAIP2Q03169 654 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 DAG1Q14118 895 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 UNC50Q53HI1 259 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 GPR158Q5T848 1215 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 AGAP9Q5VTM2 703 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 METTL7BQ6UX53 244 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 RALGPS2Q86X27 583 aaPredicted RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 C8orf59Q8N0T1 100 aaPredicted RBP9.64□□□□□ -0.87
LRRC40-201ENST00000370952 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
LRRC40-201ENST00000370952 COPS5Q92905 334 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms