RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 A0A087X1B8 175 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 HTR3EA5X5Y0 456 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 SCAMP3O14828 347 aaKnown RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 GREM1O60565 184 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 URODP06132 367 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 RFC2P35250 354 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 CLCN5P51795 746 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 PRAMEP78395 509 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 SLC14A2Q15849 920 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 TCEAL8Q8IYN2 117 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 OR13C4Q8NGS5 318 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 SREK1Q8WXA9 508 aaKnown RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 CINPQ9BW66 212 aaPredicted RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 DRC3Q9H069 523 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 COG4Q9H9E3 785 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 APOBEC2Q9Y235 224 aaKnown RBP12.81□□□□□ -0.36
GPC3-201ENST00000370818 INSL5Q9Y5Q6 135 aa12.81□□□□□ -0.36
GPC3-201ENST00000370818 ARHGAP10A1A4S6 786 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 CBX4O00257 560 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 DENRO43583 198 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 NDST3O95803 873 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 CD160O95971 181 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 PRLP01236 227 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 F11P03951 625 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 LAG3P18627 525 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 PPP3CCP48454 512 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 NAGLUP54802 743 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 WDR5P61964 334 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 CYTH1Q15438 398 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 ARL13AQ5H913 290 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 HECTD2Q5U5R9 776 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 GRAMD4Q6IC98 578 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 TDRD5Q8NAT2 981 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 MAPK15Q8TD08 544 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 ADAMTS19Q8TE59 1207 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SH3RF2Q8TEC5 729 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 PEX13Q92968 403 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 MRPL46Q9H2W6 279 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SORCS3Q9UPU3 1222 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 TMEM98Q9Y2Y6 226 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 MTF2Q9Y483 593 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 LTBP2Q14767 1821 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SH3PXD2BA1X283 911 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 H3BSA7 217 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 TEX28O15482 410 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SERPINB7O75635 380 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 WISP3O95389 354 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 AOC1P19801 751 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 CPOXP36551 454 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 PSMD7P51665 324 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 ARF5P84085 180 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 RFTN1Q14699 578 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 RNF219Q5W0B1 726 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 BORAQ6PGQ7 559 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 ISLR2Q6UXK2 745 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 CMTR2Q8IYT2 770 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 GABPB2Q8TAK5 448 aaPredicted RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 AGR3Q8TD06 166 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
GPC3-201ENST00000370818 C1orf21Q9H246 121 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 FAM96AQ9H5X1 160 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 IL21Q9HBE4 155 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 VWA7Q9Y334 891 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 SPO11Q9Y5K1 396 aa12.8□□□□□ -0.36
GPC3-201ENST00000370818 CCDC162PA2VCL2 907 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 INSIG1O15503 277 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 PEX1O43933 1283 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 LILRB3O75022 631 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 GOT2P00505 430 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 C1RP00736 705 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MBL2P11226 248 aaPredicted RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 ATP6V1B1P15313 513 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MPSTP25325 297 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 CDKN2DP55273 166 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SMAD3P84022 425 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 CSHL1Q14406 222 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SEMA3AQ14563 771 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TRIP10Q15642 601 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TBCCQ15814 346 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TMEM207Q6UWW9 146 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 CROCCP3Q8IVE0 287 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SLC26A7Q8TE54 656 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 ANKRD49Q8WVL7 239 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 UBXN10Q96LJ8 280 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 GCNAQ96QF7 691 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MRPS26Q9BYN8 205 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 ILKAPQ9H0C8 392 aaPredicted RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 PLK2Q9NYY3 685 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms