RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
RPF1-201ENST00000370654 ADCY8P40145 1251 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 MAPK10P53779 464 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 TAS2R40P59535 323 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 FANCCQ00597 558 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 NIPAL4Q0D2K0 466 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 EIF3IQ13347 325 aaKnown RBP13.12□□□□□ -0.31
RPF1-201ENST00000370654 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 ARMC12Q5T9G4 340 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 LRRC66Q68CR7 880 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 ZNF438Q7Z4V0 828 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
RPF1-201ENST00000370654 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 ACSL6Q9UKU0 697 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 CHKBQ9Y259 395 aa13.12□□□□□ -0.31
RPF1-201ENST00000370654 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 NVLO15381 856 aaKnown RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 CSF2RBP32927 897 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 GALNT2Q10471 571 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 KRT81Q14533 505 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 MARK2Q7KZI7 788 aaKnown RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 ZNF761Q86XN6 746 aaPredicted RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 SCARF2Q96GP6 870 aaPredicted RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 WDR24Q96S15 920 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 GSDMCQ9BYG8 508 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 TRNAU1APQ9NX07 287 aaKnown RBP13.11□□□□□ -0.31
RPF1-201ENST00000370654 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 PRKAB1Q9Y478 270 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 COL6A6A6NMZ7 2263 aa13.11□□□□□ -0.31
RPF1-201ENST00000370654 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 A0A1W2PQJ5 194 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 SYCE3A1L190 88 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 TMX2-CTNND1H3BSU7 103 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 PSMD11O00231 422 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 SERPING1P05155 500 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 IVLP07476 585 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 GARSP41250 739 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 GPR1P46091 355 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 CYP4F2P78329 520 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 GBE1Q04446 702 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 DPTQ07507 201 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 ITKQ08881 620 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPF1-201ENST00000370654 NR1D2Q14995 579 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 PAFAH1B3Q15102 231 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 DTX1Q86Y01 620 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 MAML1Q92585 1016 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 CCDC74BQ96LY2 380 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 RIOK2Q9BVS4 552 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPF1-201ENST00000370654 CNOT6Q9ULM6 557 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 CAPN11Q9UMQ6 739 aa13.1□□□□□ -0.31
RPF1-201ENST00000370654 OAS3Q9Y6K5 1087 aaKnown RBP13.1□□□□□ -0.31
RPF1-201ENST00000370654 SDK2Q58EX2 2172 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 A0A0J9YYE9 177 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 RHPN2P1A8MT19 583 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 INPP4BO15327 924 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 CLDN7O95471 211 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 CPNE6O95741 557 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 TRBC1P01850 177 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 GYPCP04921 128 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 HLA-DQB2P05538 268 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 LIPCP11150 499 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 FGF3P11487 239 aaPredicted RBP13.09□□□□□ -0.31
RPF1-201ENST00000370654 TEAD1P28347 426 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 SERPINB6P35237 376 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ACTR1BP42025 376 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 STC1P52823 247 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ACTR1AP61163 376 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ZBED6P86452 979 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 PYCR3Q53H96 274 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ALG1LQ6GMV1 187 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
RPF1-201ENST00000370654 ADAMTSL4Q6UY14 1074 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 USP45Q70EL2 814 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 PIM3Q86V86 326 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 SYN2Q92777 582 aaPredicted RBP13.09□□□□□ -0.31
RPF1-201ENST00000370654 EXTL1Q92935 676 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 AP2M1Q96CW1 435 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 MED8Q96G25 268 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 COX14Q96I36 57 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 CMKLR1Q99788 373 aa13.09□□□□□ -0.31
RPF1-201ENST00000370654 TDRD1Q9BXT4 1180 aaKnown RBP13.09□□□□□ -0.31
RPF1-201ENST00000370654 IGHV1OR21-1A0A087WYE8 117 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms