RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 HNMTP50135 292 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 CORO7P57737 925 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 STXBP1P61764 594 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SPESP1Q6UW49 350 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 DAW1Q8N136 415 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ZBTB2Q8N680 514 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TSEN2Q8NCE0 465 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 TEX47Q8TBZ9 253 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 AP2M1Q96CW1 435 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PCED1BQ96HM7 432 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 IL12RB2Q99665 862 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 NEK6Q9HC98 313 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF214Q9UL59 606 aaPredicted RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 PPP1R11O60927 126 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 FGF1P05230 155 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 C8AP07357 584 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 C4BPBP20851 252 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SLC6A2P23975 617 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 FPGSQ05932 587 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CAPN13Q6MZZ7 669 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PYROXD2Q8N2H3 581 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 LRRC52Q8N7C0 313 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SLC47A1Q96FL8 570 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ABCB8Q9NUT2 735 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 RPS6KA6Q9UK32 745 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 OR5F1O95221 314 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CCNA2P20248 432 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 USP46P62068 366 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CAP1Q01518 475 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SLC20A2Q08357 652 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 RFX4Q33E94 735 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PHF13Q86YI8 300 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 BAP1Q92560 729 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 KCNS3Q9BQ31 491 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 RACGAP1Q9H0H5 632 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SYNPO2Q9UMS6 1093 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 GMPPBQ9Y5P6 360 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 U3KQV3 271 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 KIAA1210Q9ULL0 1709 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CPED1A4D0V7 1026 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 A8MU76 341 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 LIN7AO14910 233 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SNPHO15079 494 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 OR1F1O43749 312 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 GPM6BQ13491 265 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 MSANTD2Q6P1R3 559 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ADGRG6Q86SQ4 1221 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PEG10Q86TG7 708 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 C8orf59Q8N0T1 100 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TERB1Q8NA31 727 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ITCHQ96J02 903 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 EPB41L1Q9H4G0 881 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PCDH18Q9HCL0 1135 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 BATF3Q9NR55 127 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 MRPS33Q9Y291 106 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TRBC1P01850 177 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PTPN9P43378 593 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 USP4Q13107 963 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 LSM12Q3MHD2 195 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PTPN20Q4JDL3 420 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 BRMS1LQ5PSV4 323 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TSHZ1Q6ZSZ6 1077 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 GPR180Q86V85 440 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 NARS2Q96I59 477 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 KLHL32Q96NJ5 620 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 AIF1LQ9BQI0 150 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 EBPLQ9BY08 206 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 EHD3Q9NZN3 535 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 GJA1P17302 382 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TPP2P29144 1249 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ALDH4A1P30038 563 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 MSX2P35548 267 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 BNC1Q01954 994 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CAMK1Q14012 370 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ARSHQ5FYA8 562 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 XYLT1Q86Y38 959 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 TSSK3Q96PN8 268 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 MRIQ9BWK5 157 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 FGFBP2Q9BYJ0 223 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 AGXT2Q9BYV1 514 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 KCNN2Q9H2S1 579 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 EFR3BQ9Y2G0 817 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PCDHGC5Q9Y5F6 944 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SLC38A8A6NNN8 435 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 FAM25EA8MYX2 175 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 PSMD9O00233 223 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 SIN3BO75182 1162 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 ZBTB48P10074 688 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 LMO2P25791 158 aa8.53□□□□□ -1.04
ABCA4-201ENST00000370225 CCND3P30281 292 aaPredicted RBP8.53□□□□□ -1.04
ABCA4-201ENST00000370225 NAE1Q13564 534 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms