RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 DESI2Q9BSY9 194 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 MLPHQ9BV36 600 aaPredicted RBP20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 HEMGNQ9BXL5 484 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 PHPT1Q9NRX4 125 aaPredicted RBP20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 SLC17A4Q9Y2C5 497 aa20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 ZFC3H1O60293 1989 aaKnown RBP20.48■□□□□ 0.87
SMNDC1-201ENST00000369592 TRABD2BA6NFA1 517 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 PDE2AO00408 941 aaPredicted RBP20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 MT-CYBP00156 380 aaPredicted RBP20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 GUSBP11Q6P575 273 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 OGFOD3Q6PK18 319 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 KDELC1Q6UW63 502 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 AP2M1Q96CW1 435 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 COX14Q96I36 57 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 VAT1Q99536 393 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 ADGRE3Q9BY15 652 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 OSBPL8Q9BZF1 889 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 SEPT10Q9P0V9 454 aa20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 CNOT6Q9ULM6 557 aaKnown RBP20.47■□□□□ 0.87
SMNDC1-201ENST00000369592 LOC285095A0A1B0GVY8 99 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 PRSS38A1L453 326 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 RGSL1A5PLK6 1076 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 PYGMP11217 842 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 SPINT3P49223 89 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 RWDD2BP57060 319 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 CDK18Q07002 472 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 TARDBPQ13148 414 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 NR0B2Q15466 257 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 HENMT1Q5T8I9 393 aaKnown RBP20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 RD3Q7Z3Z2 195 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 KIAA1328Q86T90 577 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 ZC3H18Q86VM9 953 aaKnown RBP20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 CCDC50Q8IVM0 306 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 ZNF567Q8N184 647 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 PDCD7Q8N8D1 485 aaKnown RBP20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 IFI44Q8TCB0 444 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 GPBAR1Q8TDU6 330 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 HTR3CQ8WXA8 447 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 FCRL5Q96RD9 977 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 TMEM168Q9H0V1 697 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 MAGEE1Q9HCI5 957 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 CD84Q9UIB8 345 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 ST14Q9Y5Y6 855 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 ADGRG1Q9Y653 693 aa20.46■□□□□ 0.87
SMNDC1-201ENST00000369592 URB1O60287 2271 aaKnown RBP20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 DDX3YO15523 660 aaKnown RBP20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 IVLP07476 585 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 CTSEP14091 401 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 JUPP14923 745 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 KIF5AQ12840 1032 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 GALNT3Q14435 633 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 PERM1Q5SV97 790 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 RAET1GQ6H3X3 334 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 AADACL2Q6P093 401 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 TMC3Q7Z5M5 1100 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 GKN2Q86XP6 184 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 NRROSQ86YC3 692 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 GPR156Q8NFN8 814 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 ACTL9Q8TC94 416 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 HAUS1Q96CS2 278 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 RIOK2Q9BVS4 552 aaKnown RBP20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 CYP4F12Q9HCS2 524 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 EVA1BQ9NVM1 165 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 NFKBIL1Q9UBC1 381 aaPredicted RBP20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 UNC13CQ8NB66 2214 aa20.45■□□□□ 0.86
SMNDC1-201ENST00000369592 C1orf232A0A0U1RR37 186 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 NDST3O95803 873 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 MT-CO3P00414 261 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 EPOP01588 193 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 PYGLP06737 847 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 NFKB1P19838 968 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 GPR1P46091 355 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 NAP1L1P55209 391 aaKnown RBP20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 GSDMDP57764 484 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 EFL1Q7Z2Z2 1120 aaKnown RBP20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 LYSMD3Q7Z3D4 306 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 C17orf82Q86X59 251 aaPredicted RBP20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 PROSER1Q86XN7 944 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 ARL10Q8N8L6 244 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 KYQ8NBH2 561 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 CCL4L1Q8NHW4 92 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 OXNAD1Q96HP4 312 aaPredicted RBP20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 GORASP1Q9BQQ3 440 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 TRNAU1APQ9NX07 287 aaKnown RBP20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 FAM153AQ9UHL3 310 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 PADI4Q9UM07 663 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 CLCA2Q9UQC9 943 aa20.44■□□□□ 0.86
SMNDC1-201ENST00000369592 DSPP15924 2871 aaKnown RBP20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 MACROD2A1Z1Q3 448 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 NOBOXO60393 691 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 RBL1P28749 1068 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 POLD2P49005 469 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 RPIAP49247 311 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 OTUD4Q01804 1114 aaKnown RBP20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 RTP5Q14D33 572 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 KIF26BQ2KJY2 2108 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 TXLNBQ8N3L3 684 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 RNF10Q8N5U6 811 aaKnown RBP20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 MDM1Q8TC05 714 aa20.43■□□□□ 0.86
SMNDC1-201ENST00000369592 SCG3Q8WXD2 468 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms