RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 OAS3Q9Y6K5 1087 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 FOLH1Q04609 750 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 ZNF460Q14592 562 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 CCNYL2Q5T2Q4 361 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 C7orf57Q8NEG2 295 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 UBE2E3Q969T4 207 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 MRPL57Q9BQC6 102 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 WDR55Q9H6Y2 383 aaPredicted RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 SEPT4O43236 478 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 MTHFRP42898 656 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 MRPS5P82675 430 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 B3GNT6Q6ZMB0 384 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 USP50Q70EL3 339 aaPredicted RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 CHST9Q7L1S5 443 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 PHYKPLQ8IUZ5 450 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 CLPTM1LQ96KA5 538 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 RBMX2Q9Y388 322 aaKnown RBP18.14■□□□□ 0.49
SNX27-202ENST00000368841 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.49
SNX27-202ENST00000368841 UGT2B4P06133 528 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 F7P08709 466 aaPredicted RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 PLEKHG4Q58EX7 1191 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 FAM35AQ86V20 835 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CSH1P0DML2 217 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CSH2P0DML3 217 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CFAP206Q8IYR0 622 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 SAMD3Q8N6K7 520 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 ZHX1-C8orf76Q96EF9 292 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 TLE6Q9H808 572 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 NOL11Q9H8H0 719 aaKnown RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 EVA1BQ9NVM1 165 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 LRCH1Q9Y2L9 728 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 ZFP37Q9Y6Q3 630 aaPredicted RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 C9IYK1 514 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 FPGTO14772 594 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 TRBC1P01850 177 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 STATHP02808 62 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 GJA9P57773 515 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 HSPB3Q12988 150 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 C9orf57Q5W0N0 161 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 SLC30A6Q6NXT4 461 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CXXC5Q7LFL8 322 aaKnown RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 GPR180Q86V85 440 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 SLC9A9Q8IVB4 645 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 AGO3Q9H9G7 860 aaKnown RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 C11orf16Q9NQ32 467 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 FCF1Q9Y324 198 aaKnown RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 EPHX1P07099 455 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 MINDY4Q4G0A6 757 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 ARHGAP22Q7Z5H3 698 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 KCTD15Q96SI1 283 aaPredicted RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.13■□□□□ 0.49
SNX27-202ENST00000368841 PXDNQ92626 1479 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CASKO14936 926 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 PSMD10O75832 226 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 ADSSP30520 456 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 PGDP52209 483 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 ANKRD52Q8NB46 1076 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 FNIP1Q8TF40 1166 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 PIGUQ9H490 435 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 OAZ1P54368 228 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 MTA1Q13330 715 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 LYPLAL1Q5VWZ2 237 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 TMEM161BQ8NDZ6 487 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CKAP2Q8WWK9 683 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 SPATA5L1Q9BVQ7 753 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 CDH19Q9H159 772 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 DHRS7Q9Y394 339 aa18.13■□□□□ 0.49
SNX27-202ENST00000368841 BAZ2BQ9UIF8 2168 aaKnown RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 DIP2BQ9P265 1576 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 H3BSH0 61 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 MAFO75444 373 aaPredicted RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 ADH1CP00326 375 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 POU2F1P14859 743 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 PIK3R6Q5UE93 754 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 HTRA1Q92743 480 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 hCG_1818297A0A087WSY0 165 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 RGSL1A5PLK6 1076 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 WWP2O00308 870 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 AZIN1O14977 448 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 SUV39H1O43463 412 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 GLUD1P00367 558 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 GSTT1P30711 240 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 LIN54Q6MZP7 749 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 TAPT1Q6NXT6 567 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 SMARCD3Q6STE5 483 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 CAMK1DQ8IU85 385 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 DPEP3Q9H4B8 488 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 TRIM38O00635 465 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 MAGEB3O15480 346 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 COL9A2Q14055 689 aaPredicted RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 OR10H5Q8NGA6 315 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 HAS1Q92839 578 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 CD101Q93033 1021 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 LPIN3Q9BQK8 851 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 HIPK3Q9H422 1215 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 PTPRMP28827 1452 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 AHCYL1O43865 530 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 AUHQ13825 339 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms