RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RPL22P35268 128 aaKnown RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TNNT3P45378 269 aaPredicted RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 DPTQ07507 201 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 ZNF765Q7L2R6 523 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 KANSL1Q7Z3B3 1105 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 HEATR4Q86WZ0 1026 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 RBFAQ8N0V3 343 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 CCDC89Q8N998 374 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 GPR26Q8NDV2 337 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 DEFB124Q8NES8 71 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 WDR26Q9H7D7 661 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 ETNK1Q9HBU6 452 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 BPIFA1Q9NP55 256 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 UCKL1Q9NWZ5 548 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PKD2L2Q9NZM6 624 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PCDHGB2Q9Y5G2 931 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TMEM202A6NGA9 273 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 TOR1BO14657 336 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 BUD23O43709 281 aaKnown RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 PCDHGA12O60330 932 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 TCP1P17987 556 aaKnown RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 SDHBP21912 280 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 MSLNQ13421 630 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 PUM1Q14671 1186 aaKnown RBP eCLIP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 NAA30Q147X3 362 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 ALS2CLQ60I27 953 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 ENPP7Q6UWV6 458 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 DBX2Q6ZNG2 339 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 NAXDQ8IW45 347 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 NRSN1Q8IZ57 195 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 TSACCQ96A04 125 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 PPP1R2P1Q96PQ5 205 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 TEX101Q9BY14 249 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 PIH1D1Q9NWS0 290 aaKnown RBP15.02■□□□□ -0
SMPDL3A-201ENST00000368440 KCTD5Q9NXV2 234 aa15.02■□□□□ -0
SMPDL3A-201ENST00000368440 FADS2P1A8MWK0 482 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 GIPC1O14908 333 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 SCAMP1O15126 338 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PIAS2O75928 621 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 AP2A1O95782 977 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 CSF2P04141 144 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 NME1P15531 152 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 BPIP17213 487 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 GPR1P46091 355 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 KIAA1024LP59773 190 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 CYP1B1Q16678 543 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 ALG11Q2TAA5 492 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 HENMT1Q5T8I9 393 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 GSTA5Q7RTV2 222 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 GLT6D1Q7Z4J2 308 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 TRIM74Q86UV6 250 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 SETD7Q8WTS6 366 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PDXPQ96GD0 296 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 WDR92Q96MX6 357 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 NAP1L3Q99457 506 aaPredicted RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 LRRC40Q9H9A6 602 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 FGF22Q9HCT0 170 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 MRPL40Q9NQ50 206 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 RAB6BQ9NRW1 208 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 HOMER3Q9NSC5 361 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PAK5Q9P286 719 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 CACNB4O00305 520 aaPredicted RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 YKT6O15498 198 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 JUNDP17535 347 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 DGKAP23743 735 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 CDK3Q00526 305 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 SEMA5AQ13591 1074 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PTPRCAPQ14761 206 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 TRIP13Q15645 432 aaPredicted RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 RAVER1Q8IY67 606 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PHACTR4Q8IZ21 702 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 SLC25A45Q8N413 288 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 OR1E3Q8WZA6 343 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 FAM83DQ9H4H8 585 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 ARNT2Q9HBZ2 717 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 HACD3Q9P035 362 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 ARL5AQ9Y689 179 aa15.01□□□□□ -0.01
SMPDL3A-201ENST00000368440 COL5A1P20908 1838 aaPredicted RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 INPP4BO15327 924 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 FLRT2O43155 660 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 CBFA2T3O75081 653 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 PHF2O75151 1096 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 HOXC4P09017 264 aaPredicted RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 KCNA4P22459 653 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 HTR1BP28222 390 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 ACTN2P35609 894 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 HMGCLP35914 325 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 FDFT1P37268 417 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 COILP38432 576 aaPredicted RBP15□□□□□ -0.01
SMPDL3A-201ENST00000368440 TCEA2Q15560 299 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 ADAMTSL4Q6UY14 1074 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 NLRP8Q86W28 1048 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 CREG2Q8IUH2 290 aa15□□□□□ -0.01
SMPDL3A-201ENST00000368440 HID1Q8IV36 788 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms