RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FTSJ1Q9UET6 329 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 WASF3Q9UPY6 502 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 CSNK1G3Q9Y6M4 447 aa22.36■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF106Q9H2Y7 1883 aaKnown RBP22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 GOLGA6CA6NDK9 693 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 GOLGA6BA6NDN3 693 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 USP27XA6NNY8 438 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 FFAR2O15552 330 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 AQP9O43315 295 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 SIGLEC6O43699 453 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 DKK1O94907 266 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 METTL18O95568 372 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 LDOC1O95751 146 aaPredicted RBP22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 FUCA1P04066 466 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 FTH1P19P0C7X4 201 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 GOLGA6DP0CG33 693 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 HLA-DPA1P20036 260 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 PMLP29590 882 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 GPR1P46091 355 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 FOXK2Q01167 660 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 C1orf61Q13536 156 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 PROX2Q3B8N5 592 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 PRRT3Q5FWE3 981 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 RANBP10Q6VN20 620 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 HID1Q8IV36 788 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 SLC35F6Q8N357 371 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 LMX1AQ8TE12 382 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 CNDP2Q96KP4 475 aaKnown RBP22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 FICDQ9BVA6 458 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 PHPT1Q9NRX4 125 aaPredicted RBP22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 GOLGA6AQ9NYA3 693 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 PKD2L2Q9NZM6 624 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 JRKLQ9Y4A0 524 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 DGKBQ9Y6T7 804 aa22.35■■□□□ 1.17
ECHDC1-203ENST00000368291 TNFRSF10CO14798 259 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 RASGRP1O95267 797 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 FGGP02679 453 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 CELA2BP08218 269 aaPredicted RBP22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 ZNF569Q5MCW4 686 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 ADAMTSL4Q6UY14 1074 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 RD3Q7Z3Z2 195 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 TTC30BQ8N4P2 665 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 PNPLA1Q8N8W4 532 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 GPR26Q8NDV2 337 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 PTCD2Q8WV60 388 aaKnown RBP22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 FSD1LQ9BXM9 530 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 FRMD8Q9BZ67 464 aaPredicted RBP22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 GPR63Q9BZJ6 419 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 SLC13A1Q9BZW2 595 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 NLGN3Q9NZ94 848 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 SPASTQ9UBP0 616 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 PYCARDQ9ULZ3 195 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 AAR2Q9Y312 384 aaKnown RBP22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 PLXNB3Q9ULL4 1909 aa22.34■■□□□ 1.17
ECHDC1-203ENST00000368291 RGSL1A5PLK6 1076 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 NEMP2A6NFY4 417 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 FADS2P1A8MWK0 482 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 CEP104O60308 925 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 TOP3BO95985 862 aaKnown RBP22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 FGF1P05230 155 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 CEACAM5P06731 702 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 KELP23276 732 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 BLKP51451 505 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 DNAJC3Q13217 504 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 SNX1Q13596 522 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 PRPSAP1Q14558 356 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 PARP6Q2NL67 630 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 KCTD11Q693B1 232 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 ATL2Q8NHH9 583 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 COX14Q96I36 57 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 SRPK1Q96SB4 655 aaKnown RBP22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 APOL2Q9BQE5 337 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 FAM83DQ9H4H8 585 aa22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 CNOT6Q9ULM6 557 aaKnown RBP22.33■■□□□ 1.17
ECHDC1-203ENST00000368291 ASXL3Q9C0F0 2248 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 LY6G6EA0A0G2JKS1 128 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 PRSS38A1L453 326 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 PDE2AO00408 941 aaPredicted RBP22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 SLC4A1P02730 911 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 STIP1P31948 543 aaKnown RBP22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 MSLNQ13421 630 aaPredicted RBP22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 CCNG2Q16589 344 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 DEFB133Q30KQ1 61 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 P3H1Q32P28 736 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 DENND5AQ6IQ26 1287 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 ARHGEF18Q6ZSZ5 1173 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 TRABDQ9H4I3 376 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 NFKBIL1Q9UBC1 381 aaPredicted RBP22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 SLC17A4Q9Y2C5 497 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 U3KQA8 63 aa22.32■■□□□ 1.16
ECHDC1-203ENST00000368291 LMO7DNF2Z398 122 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 TPP1O14773 563 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 TNFP01375 233 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 ATP1A1P05023 1023 aaKnown RBP22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 BPIP17213 487 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 HMGCLP35914 325 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 POLD2P49005 469 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 DCDC1P59894 354 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 SPARCL1Q14515 664 aa22.31■■□□□ 1.16
ECHDC1-203ENST00000368291 TCEA2Q15560 299 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms