RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 NPC1O15118 1278 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MID1O15344 667 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 FGF10O15520 208 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 DAPK3O43293 454 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 OIP5O43482 229 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 BUB1O43683 1085 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 B3GALT2O43825 422 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 BUB1BO60566 1050 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CLEC3AO75596 197 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 ZMPSTE24O75844 475 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PROSCO94903 275 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 LCA5LO95447 670 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CD160O95971 181 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SCG5P05408 212 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SRPRAP08240 638 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CLEC2LP0C7M8 214 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 ERCC2P18074 760 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 AMPD1P23109 780 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CNTFP26441 200 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CYLC1P35663 651 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 NNMTP40261 264 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 P2RY2P41231 377 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PTGER3P43115 390 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MAGEA1P43355 309 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PSMD8P48556 350 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MARCKSL1P49006 195 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MAPKAPK2P49137 400 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SERPINH1P50454 418 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 TPMTP51580 245 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PLK1P53350 603 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CDH6P55285 790 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SULT2A1Q06520 285 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MAP4K2Q12851 820 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SLC12A1Q13621 1099 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 DPYSQ14117 519 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 ELAVL3Q14576 367 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 POLD3Q15054 466 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SPA17Q15506 151 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 DLG2Q15700 870 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PLK5Q496M5 336 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 FAM182AQ5T1J6 154 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 C9orf64Q5T6V5 341 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PMS2CLQ68D20 193 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 C22orf39Q6P5X5 142 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 TLDC1Q6P9B6 456 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 ARHGAP36Q6ZRI8 547 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 RIPOR1Q6ZS17 1223 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 RFX8Q6ZV50 586 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 POLNQ7Z5Q5 900 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SYT9Q86SS6 491 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 WDR5BQ86VZ2 330 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 TMTC1Q8IUR5 882 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MMAAQ8IVH4 418 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 RHOT2Q8IXI1 618 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 TMEFF1Q8IYR6 380 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CCDC170Q8IYT3 715 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 STK40Q8N2I9 435 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SH2D3CQ8N5H7 860 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CHST14Q8NCH0 376 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 OR2T3Q8NH03 318 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CCT6BQ92526 530 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PRCCQ92733 491 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 ARHGEF2Q92974 986 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 RCC1LQ96I51 464 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CSPG4P5Q96PW8 444 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MDFIQ99750 246 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SORBS1Q9BX66 1292 aaKnown RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CALN1Q9BXU9 219 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 DUSP15Q9H1R2 295 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CATSPERBQ9H7T0 1116 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 GRPEL1Q9HAV7 217 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PCDH18Q9HCL0 1135 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MRGBPQ9NV56 204 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 NCDNQ9UBB6 729 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 TRIM10Q9UDY6 481 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MBD1Q9UIS9 605 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PRDM4Q9UKN5 801 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 SARDHQ9UL12 918 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 HS3ST2Q9Y278 367 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 CRYL1Q9Y2S2 319 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 PCDHA13Q9Y5I0 950 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 NPFFR2Q9Y5X5 522 aa3.18□□□□□ -1.9
PTPRC-203ENST00000367367 EPN1Q9Y6I3 576 aaPredicted RBP3.18□□□□□ -1.9
PTPRC-203ENST00000367367 MACROD2A1Z1Q3 448 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 LRRD1A4D1F6 860 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 FAM47DPA6NHR8 397 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 PATE3B3GLJ2 98 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 EIF3CLB5ME19 914 aaKnown RBP3.17□□□□□ -1.9
PTPRC-203ENST00000367367 J3KR12 359 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 DFFAO00273 331 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 PAX4O43316 350 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 SPOPO43791 374 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 MFSD11O43934 449 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 ZNF821O75541 412 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-203ENST00000367367 GJB3O75712 270 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 KRT37O76014 449 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 MTA2O94776 668 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 TMCC1O94876 653 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 UBXN7O94888 489 aa3.17□□□□□ -1.9
PTPRC-203ENST00000367367 IPO7O95373 1038 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms