RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PBLDP30039 288 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARHGAP8P85298 464 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 BLMHQ13867 455 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 KCTD4Q8WVF5 259 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 POLR1BQ9H9Y6 1135 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 CLIC5Q9NZA1 410 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 R3HDM2Q9Y2K5 976 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 CACNA1CQ13936 2221 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 M0R2N6 131 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 STK16O75716 305 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 RCVRNP35243 200 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 CDK9P50750 372 aaKnown RBP12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 HSPA14Q0VDF9 509 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 DNAJB14Q8TBM8 379 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 FCGR1BQ92637 280 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
CDC42BPA-203ENST00000366766 MATN3O15232 486 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ATG13O75143 517 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ANGPT1Q15389 498 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 RETREG1Q9H6L5 497 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 GABRDO14764 452 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC26A3P40879 764 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ALYREFQ86V81 257 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 CACTIN-AS1Q8N1I8 211 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ADI1Q9BV57 179 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 TRIM8Q9BZR9 551 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 PIH1D1Q9NWS0 290 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ATP6V1HQ9UI12 483 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 COG5Q9UP83 839 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 TCAF1Q9Y4C2 921 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 HDCP19113 662 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 CENPAP49450 140 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 RPL38P63173 70 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SNRNP27Q8WVK2 155 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC47A1Q96FL8 570 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 POLR2JP52435 117 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC24A5Q71RS6 500 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 INTS7Q9NVH2 962 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 XKR6Q5GH73 641 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SNX27Q96L92 541 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARHGEF3Q9NR81 526 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ESR1P03372 595 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 HTR1BP28222 390 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 THOP1P52888 689 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 PWP1Q13610 501 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SPESP1Q6UW49 350 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 PDGFDQ9GZP0 370 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 MIOSQ9NXC5 875 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 MYO5AQ9Y4I1 1855 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 FYNP06241 537 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 PRPS2P11908 318 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ACLYP53396 1101 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 MYO19Q96H55 970 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZFYVE1Q9HBF4 777 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ARID1BQ8NFD5 2236 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 CHST10O43529 356 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 RGS1Q08116 209 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 CAPN13Q6MZZ7 669 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 MACC1Q6ZN28 852 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 CXXC5Q7LFL8 322 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF614Q8N883 585 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 C1orf127Q8N9H9 656 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC27A6Q9Y2P4 619 aa12.01□□□□□ -0.49
CDC42BPA-203ENST00000366766 ENDOD1O94919 500 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 KELP23276 732 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 HNMTP50135 292 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 RALGPS1Q5JS13 557 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CHSY3Q70JA7 882 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF540Q8NDQ6 660 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 MCRS1Q96EZ8 462 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PGLYRP2Q96PD5 576 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 MAGEE1Q9HCI5 957 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PTTG2Q9NZH5 202 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 ALOX12P18054 663 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FLT3P36888 993 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC5A9Q2M3M2 681 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CDYL2Q8N8U2 506 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZDHHC6Q9H6R6 413 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CNTN6Q9UQ52 1028 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 MRPS33Q9Y291 106 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 BCAP31P51572 246 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 USP46P62068 366 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FNDC3BQ53EP0 1204 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 NOL9Q5SY16 702 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF599Q96NL3 588 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 A0A1B0GVM2 712 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 TCAF2A6NFQ2 919 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms