RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TRIM9Q9C026 710 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 ELOVL4Q9GZR5 314 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 TNMDQ9H2S6 317 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 SMYD3Q9H7B4 428 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 UNKLQ9H9P5 680 aaKnown RBP5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 KIAA1586Q9HCI6 787 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 AGPAT3Q9NRZ7 376 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 EHD2Q9NZN4 543 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 CHORDC1Q9UHD1 332 aaPredicted RBP5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 MTMR6Q9Y217 621 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 LUC7L2Q9Y383 392 aaKnown RBP5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 EPN1Q9Y6I3 576 aaPredicted RBP5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 CHD8Q9HCK8 2581 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 USP24Q9UPU5 2620 aa5.44□□□□□ -1.54
RNU4-4P-201ENST00000364588 GON4LQ3T8J9 2241 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PRAMEF33A0A0G2JMD5 474 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SPAARA0A1B0GVQ0 90 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 E2F8A0AVK6 867 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 TBC1D3BA6NDS4 549 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 ZAR1LA6NP61 321 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SPTLC2O15270 562 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 EIF3DO15371 548 aaKnown RBP eCLIP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PRAMEF10O60809 474 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 TULP3O75386 442 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 RTN3O95197 1032 aaPredicted RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 NUDT3O95989 172 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SBK3P0C264 359 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 CEACAM1P13688 526 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 ENGP17813 658 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 MALP21145 153 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 CSRP1P21291 193 aaKnown RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 EIF2DP41214 584 aaKnown RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PPP3CCP48454 512 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PGFP49763 221 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 GAD2Q05329 585 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 BIRC3Q13489 604 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PSMD6Q15008 389 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 ZNF699Q32M78 642 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PREPLQ4J6C6 727 aaPredicted RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 C10orf76Q5T2E6 689 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 HECTD3Q5T447 861 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 LYSMD4Q5XG99 296 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 Q6ZNX1 250 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 ACOT1Q86TX2 421 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 TMEM25Q86YD3 366 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PDSS2Q86YH6 399 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 BBS7Q8IWZ6 715 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 XXYLT1Q8NBI6 393 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 LINC00301Q8NCQ3 95 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 C3orf20Q8ND61 904 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SCFD1Q8WVM8 642 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SYAP1Q96A49 352 aaPredicted RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 RGMAQ96B86 450 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 PTCD3Q96EY7 689 aaKnown RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 Q96MF0 132 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 KLHL32Q96NJ5 620 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 GTPBP2Q9BX10 602 aaKnown RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 TLR10Q9BXR5 811 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 NUSAP1Q9BXS6 441 aaKnown RBP5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 LRRC27Q9C0I9 530 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 NACA2Q9H009 215 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 SDCBP2Q9H190 292 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 BLZF1Q9H2G9 400 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 KCTD5Q9NXV2 234 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 TBC1D14Q9P2M4 693 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 ZNHIT2Q9UHR6 403 aa5.43□□□□□ -1.54
RNU4-4P-201ENST00000364588 CCDC78A2IDD5 438 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 POLR2DO15514 142 aaKnown RBP5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 HOXC11O43248 304 aaPredicted RBP5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 STX6O43752 255 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 EXOC3O60645 756 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 BEST1O76090 585 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 IL33O95760 270 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 TBX18O95935 607 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 CHEK2O96017 543 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 CCDC130P13994 396 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 HOXB2P14652 356 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 GABRG2P18507 467 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 CXCR5P32302 372 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 TNFRSF4P43489 277 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 ATXN3P54252 364 aaPredicted RBP5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 LMAN2Q12907 356 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 ZNF667Q5HYK9 610 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 SHC4Q6S5L8 630 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 OLFML1Q6UWY5 402 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 PAQR9Q6ZVX9 377 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 UNC13DQ70J99 1090 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 GRAMD1CQ8IYS0 662 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 LNX2Q8N448 690 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 TERB1Q8NA31 727 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 IQUBQ8NA54 791 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 ZMIZ2Q8NF64 920 aa5.42□□□□□ -1.54
RNU4-4P-201ENST00000364588 SCAMP4Q969E2 229 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms