RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TP73O15350 636 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 GLP2RO95838 553 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 SOD2P04179 222 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PSMC3P17980 439 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 GLDCP23378 1020 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PPM1AP35813 382 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 CDK18Q07002 472 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 DLG1Q12959 904 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 MAPK11Q15759 364 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 TMPRSS6Q8IU80 811 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 CNTD1Q8N815 330 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 ZSCAN18Q8TBC5 510 aaPredicted RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 TAMM41Q96BW9 452 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 CITED4Q96RK1 184 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 CPNE1Q99829 537 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 HSFX1Q9UBD0 423 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 WARS2Q9UGM6 360 aaKnown RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 CAPN8A6NHC0 703 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 E9PBE3 544 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 RFPL2O75678 378 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 ARHGAP15Q53QZ3 475 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 FBXO48Q5FWF7 155 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 LRRC73Q5JTD7 316 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 GRTP1Q5TC63 336 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PDPK2PQ6A1A2 396 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 ARCQ7LC44 396 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 OTOAQ7RTW8 1153 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 AMIGO2Q86SJ2 522 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 KBTBD2Q8IY47 623 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 ZFP28Q8NHY6 868 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 DCDC2Q9UHG0 476 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 LGALS13Q9UHV8 139 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 FBXO5Q9UKT4 447 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 AGO1Q9UL18 857 aaKnown RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 CAB39Q9Y376 341 aaPredicted RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 A0A0U1RQS6 177 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 LINC00854A0A1B0GVQ3 168 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 INPPL1O15357 1258 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 SRP72O76094 671 aaKnown RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 C2P06681 752 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 FMO4P31512 558 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 FAM189BP81408 668 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 RAD51Q06609 339 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 SMARCB1Q12824 385 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 GRM3Q14832 879 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PRKD1Q15139 912 aaPredicted RBP9.18□□□□□ -0.94
CALD1-202ENST00000361901 HS6ST3Q8IZP7 471 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 GANCQ8TET4 914 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 TMEM175Q9BSA9 504 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 CCDC134Q9H6E4 229 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 PKP3Q9Y446 797 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 NOX1Q9Y5S8 564 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
CALD1-202ENST00000361901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 NEDD8-MDP1E9PL57 170 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 J3QRK9 145 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 SUPT7LO94864 414 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 SEMA3DO95025 777 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 NELFEP18615 380 aaKnown RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 ATF6P18850 670 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 FGFR3P22607 806 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 CD68P34810 354 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 NAGLUP54802 743 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 RASA2Q15283 850 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 PDK4Q16654 411 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 RSBN1Q5VWQ0 802 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 MRNIPQ6NTE8 343 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 RETSATQ6NUM9 610 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 CCDC81Q6ZN84 652 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 NCSTNQ92542 709 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 HDAC2Q92769 488 aaKnown RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 FBXL8Q96CD0 374 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 MOCOSQ96EN8 888 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 FCRL3Q96P31 734 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 CLSTN3Q9BQT9 956 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 MLPHQ9BV36 600 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 TRAV19A0A0A6YYK7 116 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 PRR23AA6NEV1 266 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 GJB3O75712 270 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 PEX2P28328 305 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 CASP2P42575 452 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 HNRNPDQ14103 355 aaKnown RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 TAZQ16635 292 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 POTEHQ6S545 545 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 CD300LGQ6UXG3 332 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 AFAP1L2Q8N4X5 818 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 TSPAN14Q8NG11 270 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 SLC7A6OSQ96CW6 309 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 BBS2Q9BXC9 721 aa9.17□□□□□ -0.94
CALD1-202ENST00000361901 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
CALD1-202ENST00000361901 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms