RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 VIPP01282 170 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 NTRK1P04629 796 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 FECHP22830 423 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 APLP1P51693 650 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PRKAG1P54619 331 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 BIKQ13323 160 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ADGRF1Q5T601 910 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PPP2R2DQ66LE6 453 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 DNAJB7Q7Z6W7 309 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 C10orf107Q8IVU9 208 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 VMP1Q96GC9 406 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PRICKLE1Q96MT3 831 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 YIPF1Q9Y548 306 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 EDF1O60869 148 aaKnown RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ATP13A5Q4VNC0 1218 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 OSBPL10Q9BXB5 764 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 KIF1CO43896 1103 aaKnown RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 HIST1H2ABP04908 130 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 NR2F1P10589 423 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 EPORP19235 508 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 SERPINB1P30740 379 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 MAGEA10P43363 369 aaPredicted RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 NDUFA9Q16795 377 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 METTL21CQ5VZV1 264 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 HIST3H2AQ7L7L0 130 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 CMC1Q7Z7K0 106 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ZNF605Q86T29 641 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 CUZD1Q86UP6 607 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PCDH20Q8N6Y1 951 aaKnown RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 ARNTL2Q8WYA1 636 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 HIST1H2ACQ93077 130 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ZNF607Q96SK3 696 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TRIT1Q9H3H1 467 aaKnown RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 CHRAC1Q9NRG0 131 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 MRTO4Q9UKD2 239 aaKnown RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 PCDHGB3Q9Y5G1 929 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ZBTB22O15209 634 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 RGS5O15539 181 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 UMPSP11172 480 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 GNPDA1P46926 289 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 CCR4P51679 360 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ACAP2Q15057 778 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TAF1AQ15573 450 aaPredicted RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 ADGRD1Q6QNK2 874 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PCDH19Q8TAB3 1148 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PPCDCQ96CD2 204 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TBATAQ96M53 351 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 FCRL5Q96RD9 977 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 SEMA3GQ9NS98 782 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 FETUBQ9UGM5 382 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 POLR1DQ9Y2S0 133 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PEX1O43933 1283 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PDE5AO76074 875 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 KIAA0930Q6ICG6 404 aaPredicted RBP13.44□□□□□ -0.26
LDB3-202ENST00000361373 FAM124AQ86V42 546 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 TDRPQ86YL5 185 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 RNF148Q8N7C7 305 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 HERVK_113Q902F9 699 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PWWP2AQ96N64 755 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 PCBD2Q9H0N5 130 aa13.44□□□□□ -0.26
LDB3-202ENST00000361373 RFXANKO14593 260 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 SLC22A3O75751 556 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 PKNOX1P55347 436 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 LUZP2Q86TE4 346 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 DSELQ8IZU8 1212 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 ZFRQ96KR1 1074 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 PCDH12Q9NPG4 1184 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 INTS10Q9NVR2 710 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 COPG1Q9Y678 874 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 H3BNH8 94 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 GABRDO14764 452 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 SSR2P43308 183 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 MRPS15P82914 257 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 TYW3Q6IPR3 259 aaKnown RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 STYXL1Q9Y6J8 313 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 SP100P23497 879 aaPredicted RBP13.43□□□□□ -0.26
LDB3-202ENST00000361373 UBE3AQ05086 875 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 LDLRAP1Q5SW96 308 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 OR52L1Q8NGH7 329 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 LRRN4Q8WUT4 740 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
LDB3-202ENST00000361373 MYRFQ9Y2G1 1151 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms