RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ZCCHC7Q8N3Z6 543 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 STX19Q8N4C7 294 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 HJURPQ8NCD3 748 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 OR2T34Q8NGX1 318 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 OR2T3Q8NH03 318 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 KCTD13Q8WZ19 329 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 APOL4Q9BPW4 351 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TRPC4Q9UBN4 977 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ZMYND8Q9ULU4 1186 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ZBTB48P10074 688 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 EDNRBP24530 442 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 MAPK8P45983 427 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 AP5B1Q2VPB7 878 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 RALGPS2Q86X27 583 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ZNF570Q96NI8 536 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 COPS8Q99627 209 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 SIRPGQ9P1W8 387 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 NENFQ9UMX5 172 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 NPHS1O60500 1241 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 KCNE1P15382 129 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 LCP2Q13094 533 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TSNQ15631 228 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 POM121L1PQ3SYA9 428 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 ACBD5Q5T8D3 534 aaPredicted RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TREML1Q86YW5 311 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 SMOQ99835 787 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 MRPL17Q9NRX2 175 aaKnown RBP16.31■□□□□ 0.2
SCAF1-201ENST00000360565 TMCO1Q9UM00 188 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 FADS3Q9Y5Q0 445 aa16.31■□□□□ 0.2
SCAF1-201ENST00000360565 MYO18AQ92614 2054 aaKnown RBP16.3■□□□□ 0.2
SCAF1-201ENST00000360565 LRATO95237 230 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 CST1P01037 141 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 C21orf59P57076 290 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 IKBKEQ14164 716 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 PAFAH1B3Q15102 231 aaKnown RBP16.3■□□□□ 0.2
SCAF1-201ENST00000360565 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 ERAP2Q6P179 960 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 CACUL1Q86Y37 369 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 CLHC1Q8NHS4 586 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 OR52E6Q96RD3 313 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 RNF208Q9H0X6 261 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 REEP1Q9H902 201 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 TMEM39AQ9NV64 488 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 ADPRHL2Q9NX46 363 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 C3orf18Q9UK00 162 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 TBC1D30Q9Y2I9 924 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 TMEM233B4DJY2 109 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 DLGAP3O95886 979 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 ANXA6P08133 673 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 CES1P23141 567 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 NDST2P52849 883 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 THOP1P52888 689 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 SLC10A7Q0GE19 358 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 TRAPPC5Q8IUR0 188 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 NPLOC4Q8TAT6 608 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 ZNF558Q96NG5 402 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 PRKAG3Q9UGI9 489 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
SCAF1-201ENST00000360565 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 DLX3O60479 287 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 CCNHP51946 323 aaPredicted RBP16.3■□□□□ 0.2
SCAF1-201ENST00000360565 GPR107Q5VW38 600 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 ZNF549Q6P9A3 640 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 GPR180Q86V85 440 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 LRTOMTQ8WZ04 291 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 TSSK3Q96PN8 268 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 BTBD9Q96Q07 612 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 PCDHAC1Q9H158 963 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 SLC2A6Q9UGQ3 507 aa16.3■□□□□ 0.2
SCAF1-201ENST00000360565 PIP5K1BO14986 540 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 GSTM1P09488 218 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 HCAR3P49019 387 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 EPS8Q12929 822 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TMEM63BQ5T3F8 832 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 USE1Q9NZ43 259 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 RSL24D1Q9UHA3 163 aaKnown RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 ACSL4O60488 711 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 AOC1P19801 751 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 MBLAC2Q68D91 279 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 ZNF467Q7Z7K2 595 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TBC1D21Q8IYX1 336 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 OR2T12Q8NG77 320 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 IGKV6-21A0A0C4DH24 114 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 ITGAXP20702 1163 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 PCLAFQ15004 111 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 PLCL1Q15111 1095 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 GLYATQ6IB77 296 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TIFABQ6ZNK6 161 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms