RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MAP4K5Q9Y4K4 846 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 ADCY10Q96PN6 1610 aa16.02■□□□□ 0.15
COL18A1-203ENST00000359759 FAM149AA5PLN7 773 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TPST2O60704 377 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TNFSF9P41273 254 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 YAP1P46937 504 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 BTN3A2P78410 334 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 LSM12Q3MHD2 195 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 OR4L1Q8NH43 312 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TOP1MTQ969P6 601 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ADAM2Q99965 735 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 CORO1BQ9BR76 489 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 AKAP7Q9P0M2 348 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ACKR2O00590 384 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 IFI30P13284 250 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FUT4P22083 530 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 BNC1Q01954 994 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FRRS1Q6ZNA5 592 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FRMD7Q6ZUT3 714 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 CUZD1Q86UP6 607 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.01■□□□□ 0.156e-9■■■■■ 69.6
COL18A1-203ENST00000359759 PQLC1Q8N2U9 271 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 C18orf25Q96B23 403 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 PPM1MQ96MI6 270 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ZDHHC15Q96MV8 337 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ST3GAL5Q9UNP4 418 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FRMPD4Q14CM0 1322 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FPGTO14772 594 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 XYLBO75191 536 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 RSL1D1O76021 490 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 OR7A10O76100 309 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 NTRK3Q16288 839 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 LCN1P1Q5VSP4 162 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TEFMQ96QE5 360 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TRAV19A0A0A6YYK7 116 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 RCCD1A6NED2 376 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 MID1O15344 667 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 AMHP03971 560 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 PSEN2P49810 448 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 MEA1Q16626 185 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 UBE2R2Q712K3 238 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 AHSA2Q719I0 299 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 DGCR14Q96DF8 476 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 CHCHD6Q9BRQ6 235 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 SEMA3GQ9NS98 782 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 MAFFQ9ULX9 164 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ALKQ9UM73 1620 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 WRBO00258 174 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TGFB2P61812 414 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ENPEPQ07075 957 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 CA9Q16790 459 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 TAPT1Q6NXT6 567 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 OR2T12Q8NG77 320 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 SKA1Q96BD8 255 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 BRINP2Q9C0B6 783 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 CHMP1AQ9HD42 196 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-203ENST00000359759 MGAT4AQ9UM21 535 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 ABCA8O94911 1581 aa16.01■□□□□ 0.15
COL18A1-203ENST00000359759 FOXO6A8MYZ6 492 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 RGS10O43665 173 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 VBP1P61758 197 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 FBXO48Q5FWF7 155 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 SLC4A11Q8NBS3 891 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TCF25Q9BQ70 676 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TRPV2Q9Y5S1 764 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 C9JVG2 144 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TRBC1P01850 177 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 ADORA2AP29274 412 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 RPL3P39023 403 aaKnown RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 LYPLAL1Q5VWZ2 237 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 GLYATQ6IB77 296 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TMPRSS11AQ6ZMR5 421 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TSSK3Q96PN8 268 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 EBNA1BP2Q99848 306 aaKnown RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 PRPF19Q9UMS4 504 aaKnown RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 GNEQ9Y223 722 aaKnown RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 ASF1AQ9Y294 204 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TRAF6Q9Y4K3 522 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 A0A1W2PQ72 361 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■□□ 16.1
COL18A1-203ENST00000359759 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 CDKL1Q00532 357 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 CNTN2Q02246 1040 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 ZBTB6Q15916 424 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 SMU1Q2TAY7 513 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 CERCAMQ5T4B2 595 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TBC1D21Q8IYX1 336 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 OR2L3Q8NG85 312 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 LPPQ93052 612 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 MAGEL2Q9UJ55 1249 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 PCDHGC5Q9Y5F6 944 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TCRBV9S1A1TA0A576 114 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 KCNU1A8MYU2 1149 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TUFMP49411 452 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms