RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SRFP11831 508 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CTHP32929 405 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 HMGCLP35914 325 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 POLD2P49005 469 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CLCN5P51795 746 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CTBP1Q13363 440 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 FASTKD1Q53R41 847 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 NAIF1Q69YI7 327 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 TPRG1Q6ZUI0 275 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 SDCCAG8Q86SQ7 713 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ZSWIM9Q86XI8 627 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CILP2Q8IUL8 1156 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ZNF366Q8N895 744 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 OR4L1Q8NH43 312 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 HCAR2Q8TDS4 363 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ISL2Q96A47 359 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CENPTQ96BT3 561 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 CABS1Q96KC9 395 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 MCCC1Q96RQ3 725 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 ZFYVE1Q9HBF4 777 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 SLC2A4RGQ9NR83 387 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 IL17CQ9P0M4 197 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 THAP10Q9P2Z0 257 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 DKK3Q9UBP4 350 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
PDLIM5-203ENST00000359265 FAM95CA0A1B0GW59 222 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 OR51F1A6NGY5 319 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 UPK3BL1B0FP48 263 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 UPK3BL2E5RIL1 263 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 PFDN6O15212 129 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 AHSGP02765 367 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 MPOP05164 745 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 TYK2P29597 1187 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 HNF1BP35680 557 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 MAGEA12P43365 314 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 TNFRSF4P43489 277 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 NEK3P51956 506 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 PPARDQ03181 441 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 ELAVL3Q14576 367 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 ZNF805Q5CZA5 627 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 AARS2Q5JTZ9 985 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 CHFRQ96EP1 664 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 SCRN2Q96FV2 425 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 TMEM245Q9H330 911 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 MTG2Q9H4K7 406 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 SUDS3Q9H7L9 328 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 FBXO6Q9NRD1 293 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 SNX15Q9NRS6 342 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 INTS10Q9NVR2 710 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 FKBPLQ9UIM3 349 aa13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 CORO1CQ9ULV4 474 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 MTO1Q9Y2Z2 717 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-203ENST00000359265 NPIPB15A6NHN6 443 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 GLRA3O75311 464 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 ALDOAP04075 364 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 CTSLP07711 333 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 F7P08709 466 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 HLA-EP13747 358 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 ZNF30P17039 623 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 GABRB3P28472 473 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 PMLP29590 882 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 MC4RP32245 332 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 FOXN2P32314 431 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 RPA3P35244 121 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 ABCG1P45844 678 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 SOX9P48436 509 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 GALK1P51570 392 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 MPP2Q14168 576 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 PTPRRQ15256 657 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TYSND1Q2T9J0 566 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TAF1BQ53T94 588 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 HHATQ5VTY9 493 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 EGFLAMQ63HQ2 1017 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TTC19Q6DKK2 380 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 DSG4Q86SJ6 1040 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 KCNV2Q8TDN2 545 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TCP10LQ8TDR4 215 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 TCF12Q99081 682 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 BPIFA1Q9NP55 256 aa13.81□□□□□ -0.2
PDLIM5-203ENST00000359265 HEBP1Q9NRV9 189 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms