RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CILP2Q8IUL8 1156 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 BBS5Q8N3I7 341 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 SORCS1Q8WY21 1168 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 LRRC3BQ96PB8 259 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 KCNK13Q9HB14 408 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 COPG2Q9UBF2 871 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 YBX2Q9Y2T7 364 aaKnown RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NEMP2A6NFY4 417 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CLASP2O75122 1294 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 FGF1P05230 155 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 SBK3P0C264 359 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CSE1LP55060 971 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CDKN2DP55273 166 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 RCN1Q15293 331 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 HSF5Q4G112 596 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CFAP157Q5JU67 520 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 FYB2Q5VWT5 728 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 RPS27LQ71UM5 84 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CLEC14AQ86T13 490 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 UTP4Q969X6 686 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 C1QTNF1Q9BXJ1 281 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 TUBA8Q9NY65 449 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 RFXAPO00287 272 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 HLA-DPA1P20036 260 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CSHL1Q14406 222 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 NLRP9Q7RTR0 991 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 MTDHQ86UE4 582 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 ALYREFQ86V81 257 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 ACMSDQ8TDX5 336 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 ANKRD49Q8WVL7 239 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 ISL2Q96A47 359 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 EID2BQ96D98 161 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 SCYL1Q96KG9 808 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 CATSPER2Q96P56 530 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 PPP1R2P1Q96PQ5 205 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 MRM3Q9HC36 420 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
GGPS1-202ENST00000358966 RUVBL2Q9Y230 463 aaKnown RBP12.64□□□□□ -0.39
GGPS1-202ENST00000358966 DLDP09622 509 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 MYL2P10916 166 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 OCRLQ01968 901 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 PLEKHG6Q3KR16 790 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZNF449Q6P9G9 518 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 GATA6Q92908 595 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZFYVE19Q96K21 471 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 PPP1R36Q96LQ0 422 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TMEM237Q96Q45 408 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 EBF4Q9BQW3 602 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 XPR1Q9UBH6 696 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TLK1Q9UKI8 766 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ITGB1BP2Q9UKP3 347 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TIMM22Q9Y584 194 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 HELZP42694 1942 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 G3V2L1 256 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZNF821O75541 412 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 CBX6O95503 412 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 STMN1P16949 149 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TARSP26639 723 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 PLK1P53350 603 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 RAB10P61026 200 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 NSUN2Q08J23 767 aaKnown RBP eCLIP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 DMPKQ09013 629 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 MAP7Q14244 749 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 FUT11Q495W5 492 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 VWA5B1Q5TIE3 1220 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TMEM207Q6UWW9 146 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZSWIM9Q86XI8 627 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 FAM217AQ8IXS0 508 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 FSTL5Q8N475 847 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TMEM151AQ8N4L1 468 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 ZNF366Q8N895 744 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 BRSK1Q8TDC3 778 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 MTG2Q9H4K7 406 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 SLCO3A1Q9UIG8 710 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 FKBPLQ9UIM3 349 aa12.63□□□□□ -0.39
GGPS1-202ENST00000358966 TDRKHQ9Y2W6 561 aaKnown RBP12.63□□□□□ -0.39
GGPS1-202ENST00000358966 UBA6A0AVT1 1052 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-202ENST00000358966 ANKRD66B4E2M5 251 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms