RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TUBGCP3Q96CW5 907 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 FEM1CQ96JP0 617 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TMEM79Q9BSE2 394 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ETAA1Q9NY74 926 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 BTRCQ9Y297 605 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 RNF11Q9Y3C5 154 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ANKRD12Q6UB98 2062 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 ASGR1P07306 291 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 MTHFD2P13995 350 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 CKMT2P17540 419 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 PBX3P40426 434 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 SUOXP51687 545 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 STC1P52823 247 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 NR1H2P55055 460 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 CAPRIN1Q14444 709 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 FBXO48Q5FWF7 155 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 CARM1Q86X55 608 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 ATAD1Q8NBU5 361 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 KLHDC9Q8NEP7 349 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 OR4L1Q8NH43 312 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 ZFP28Q8NHY6 868 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 DUS3LQ96G46 650 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 HIC2Q96JB3 615 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 UHRF1Q96T88 793 aaPredicted RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 SLC29A1Q99808 456 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 POLG2Q9UHN1 485 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 AURKCQ9UQB9 309 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 FAM50BQ9Y247 325 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 PCDHB5Q9Y5E4 795 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 GBF1Q92538 1859 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 CLASP2O75122 1294 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 CRCPO75575 148 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 OAZ2O95190 189 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 LINC00032P0C843 101 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 HGFP14210 728 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 OGNP20774 298 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 EEF1DP29692 281 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 ARPP19P56211 112 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 TXNL4AP83876 142 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 TNK2Q07912 1038 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 BIRC2Q13490 618 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 LAMB3Q13751 1172 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 RPS6KA2Q15349 733 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 VARS2Q5ST30 1063 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 ZBTB49Q6ZSB9 765 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 RASAL3Q86YV0 1011 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 GPR150Q8NGU9 434 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 RHEBL1Q8TAI7 183 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 BRSK1Q8TDC3 778 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 DIS3LQ8TF46 1054 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 TRIB2Q92519 343 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 PEX13Q92968 403 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 ATOH8Q96SQ7 321 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 CCT7Q99832 543 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 HAUS8Q9BT25 410 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 AARSD1Q9BTE6 412 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 TRIM15Q9C019 465 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 POPDC3Q9HBV1 291 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 TRMT13Q9NUP7 481 aaKnown RBP8.57□□□□□ -1.04
RFX3-202ENST00000358730 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.57□□□□□ -1.04
RFX3-202ENST00000358730 EGFL7Q9UHF1 273 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 RNF112Q9ULX5 631 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 PADI4Q9UM07 663 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 NDUFAF1Q9Y375 327 aa8.57□□□□□ -1.04
RFX3-202ENST00000358730 GREB1Q4ZG55 1949 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 ARHGAP10A1A4S6 786 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 SAC3D1A6NKF1 404 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 HTRA2O43464 458 aaPredicted RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 PRAMEF11O60813 436 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 RHOBTB1O94844 696 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 FGF4P08620 206 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 SERPINF2P08697 491 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 CHRM3P20309 590 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 CTGFP29279 349 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 ZNF157P51786 506 aaPredicted RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 CREB5Q02930 508 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 TAF10Q12962 218 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 LCP2Q13094 533 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 MFSD14CQ5VZR4 134 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 PRMT9Q6P2P2 845 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 ERMP1Q7Z2K6 904 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 PHYKPLQ8IUZ5 450 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 FBXO39Q8N4B4 442 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 SLC45A3Q96JT2 553 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 GPATCH1Q9BRR8 931 aaKnown RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 CCDC68Q9H2F9 335 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 TUBB1Q9H4B7 451 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 TFB2MQ9H5Q4 396 aaKnown RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 CAAP1Q9H8G2 361 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 SEMA4BQ9NPR2 832 aaPredicted RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 OLA1Q9NTK5 396 aaKnown RBP8.56□□□□□ -1.04
RFX3-202ENST00000358730 MAP10Q9P2G4 905 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 ABCD2Q9UBJ2 740 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 FRMPD3Q5JV73 1810 aa8.56□□□□□ -1.04
RFX3-202ENST00000358730 A0A1B0GTL3 188 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms