RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAM189A1O60320 539 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 UGT2B15P54855 530 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ABHD11Q8NFV4 315 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 MST1RQ04912 1400 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ROBO3Q96MS0 1386 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 NOTCH2Q04721 2471 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 G3V2T6 193 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CABYRO75952 493 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 AMHP03971 560 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PSKH1P11801 424 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ITSN1Q15811 1721 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ALFQ53S48 1182 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 HAGHLQ6PII5 290 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SLC30A10Q6XR72 485 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 VN1R5Q7Z5H4 357 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 CPSF7Q8N684 471 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PTPRUQ92729 1446 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TRMOQ9BU70 441 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 DDIT4Q9NX09 232 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TRPM5Q9NZQ8 1165 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRB2O60241 1585 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 F8P00451 2351 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PTTG1O95997 202 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SLC2A3P11169 496 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 STX4Q12846 297 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 RNASE12Q5GAN4 147 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TMIEQ8NEW7 156 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ZMYM5Q9UJ78 669 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 POLR3HQ9Y535 204 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TCRBV5S4A2TA0A5A2 114 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 PLOD2O00469 737 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 C8BP07358 591 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ITGA2P17301 1181 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 IL32P24001 234 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ECHS1P30084 290 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 GDI2P50395 445 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FAM92BQ6ZTR7 304 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 GPRIN3Q6ZVF9 776 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRA1Q86SQ6 560 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 FIBCD1Q8N539 461 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 NCKAP1Q9Y2A7 1128 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
VPS13B-203ENST00000358544 SNCAIPQ9Y6H5 919 aa6.07□□□□□ -1.44
VPS13B-203ENST00000358544 NEXMIFQ5QGS0 1516 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 KRBA1A5PL33 1030 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OAS1P00973 400 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CYP3A5P20815 502 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FGFR2P21802 821 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CENPAP49450 140 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 PLEKHG4Q58EX7 1191 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 PCID2Q5JVF3 399 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 EPGNQ6UW88 154 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FAM131BQ86XD5 332 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GATA5Q9BWX5 397 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SIX2Q9NPC8 291 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 C14orf119Q9NWQ9 140 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 PTGFRNQ9P2B2 879 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MAN2B2Q9Y2E5 1009 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 NOMO1Q15155 1222 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TBRG1Q3YBR2 411 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 DCAF12L1Q5VU92 463 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MRPL45Q9BRJ2 306 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 IPO13O94829 963 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 METTL18O95568 372 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SLC5A2P31639 672 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CYP4F8P98187 520 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 STRIP1Q5VSL9 837 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 NACC2Q96BF6 587 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CERS2Q96G23 380 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 HNRNPABQ99729 332 aaKnown RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 EML1O00423 815 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SEC22BO75396 215 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FTH1P02794 183 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF181Q2M3W8 571 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FBXO43Q4G163 708 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF767PQ75MW2 155 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OR7G1Q8NGA0 311 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ELMO3Q96BJ8 720 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MIPEPQ99797 713 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OMDQ99983 421 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 FKBP14Q9NWM8 211 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 STOX2Q9P2F5 926 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF335Q9H4Z2 1342 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GSAPA4D1B5 854 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 TISP43B9A030 160 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 STX16-NPEPL1H3BU86 382 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 B3GALNT1O75752 331 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 SERPINF2P08697 491 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 GPSM2P81274 684 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CHMP1BQ7LBR1 199 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 LAPTM4BQ86VI4 370 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 NT5MQ9NPB1 228 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 ACSS2Q9NR19 701 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 WDR70Q9NW82 654 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 OAZ3Q9UMX2 235 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 MYOCOSA0A1B0GUC4 107 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 CHURC1-FNTBB4DL54 471 aa6.06□□□□□ -1.44
VPS13B-203ENST00000358544 M0QYT0 321 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms