RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ZNF599Q96NL3 588 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 CDK5RAP1Q96SZ6 601 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 POMKQ9H5K3 350 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 BACE2Q9Y5Z0 518 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 EIF4E1BA6NMX2 242 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 MUSKO15146 869 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 TGM5O43548 720 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 ACSL4O60488 711 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 GLUD1P00367 558 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 FGF1P05230 155 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 LYNP07948 512 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 OR1D2P34982 312 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 NUDT2P50583 147 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PRAMEP78395 509 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 IRX1P78414 480 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 KLC3Q6P597 504 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 SDCCAG8Q86SQ7 713 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 DSELQ8IZU8 1212 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PGAM4Q8N0Y7 254 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 OR6P1Q8NGX9 317 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PIP4K2CQ8TBX8 421 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 CCDC124Q96CT7 223 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 PPP1R36Q96LQ0 422 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 APOL5Q9BWW9 433 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 NUF2Q9BZD4 464 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 DNMT3LQ9UJW3 386 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 KCTD3Q9Y597 815 aa14.29□□□□□ -0.12
NIPAL3-203ENST00000358028 CCL22O00626 93 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 GJB3O75712 270 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 S1PR4O95977 384 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 EPHA3P29320 983 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC6A4P31645 630 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 ATP5C1P36542 298 aaKnown RBP14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC26A3P40879 764 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 ACVR1Q04771 509 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 PEX6Q13608 980 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 LAMB3Q13751 1172 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 ANKRD54Q6NXT1 300 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 CFAP52Q8N1V2 620 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 KDM1BQ8NB78 822 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 EFCAB1Q9HAE3 211 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 EML4Q9HC35 981 aaKnown RBP14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 HACD3Q9P035 362 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 MARCH4Q9P2E8 410 aaPredicted RBP14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 ADAMTS6Q9UKP5 1117 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 CHD5Q8TDI0 1954 aa14.28□□□□□ -0.12
NIPAL3-203ENST00000358028 OR51F1A6NGY5 319 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 H3BNX3 289 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 AIM2O14862 343 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 ZMPSTE24O75844 475 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 WISP3O95389 354 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 RBP1P09455 135 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 CCDC166P0CW27 439 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 UQCRBP14927 111 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 HOXD9P28356 352 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 CLCN2P51788 898 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 GNA12Q03113 381 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 GALNT1Q10472 559 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 ACAP2Q15057 778 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 LEXMQ3ZCV2 418 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 TCHHL1Q5QJ38 904 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 ALG1LQ6GMV1 187 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC8B1Q6J4K2 584 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 LILRA6Q6PI73 481 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 SYCE2Q6PIF2 218 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 RNF111Q6ZNA4 994 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 LDB1Q86U70 411 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 RNF135Q8IUD6 432 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 C12orf76Q8N812 135 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 CEP70Q8NHQ1 597 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 FAM45AQ8TCE6 357 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 DLG3Q92796 817 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 PEX13Q92968 403 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 UBXN10Q96LJ8 280 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 RETREG1Q9H6L5 497 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 MRPL40Q9NQ50 206 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 UTP6Q9NYH9 597 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 VWA7Q9Y334 891 aa14.27□□□□□ -0.12
NIPAL3-203ENST00000358028 NEMP2A6NFY4 417 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 A8MT66 165 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 AHCYL1O43865 530 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 GOT2P00505 430 aaKnown RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 EPOP01588 193 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 FESP07332 822 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 SLC11A2P49281 568 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 CDKN2DP55273 166 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 RAB33AQ14088 237 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 GALNT3Q14435 633 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms