RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 EML3Q32P44 896 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 LDLRAP1Q5SW96 308 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZNF678Q5SXM1 525 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 NOL9Q5SY16 702 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 EFCAB12Q6NXP0 572 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CRTC3Q6UUV7 619 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PLEKHG7Q6ZR37 379 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 PIWIL3Q7Z3Z3 882 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 SMG8Q8ND04 991 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 HPS1Q92902 700 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 TSGA13Q96PP4 275 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 HERC2P3Q9BVR0 1158 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 ALG2Q9H553 416 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 IL1RL2Q9HB29 575 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 DNAJC15Q9Y5T4 150 aa12.1□□□□□ -0.47
SMARCAL1-201ENST00000357276 COL4A4P53420 1690 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ASPDHA6ND91 283 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ALBP02768 609 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 RBP1P09455 135 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CPB1P15086 417 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ITIH1P19827 911 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CHRM3P20309 590 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 HRH2P25021 359 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ADRA1BP35368 520 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CDC20Q12834 499 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CSHL1Q14406 222 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 AGAP9Q5VTM2 703 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ESRP1Q6NXG1 681 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 SAMD7Q7Z3H4 446 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 MIER2Q8N344 545 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 MTRRQ9UBK8 725 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 SCAF8Q9UPN6 1271 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ANGPT2O15123 496 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 AXIN1O15169 862 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 MGEA5O60502 916 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 HPRP00739 348 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 LTA4HP09960 611 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 RAD23AP54725 363 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 NDUFA5Q16718 116 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 Q3C1V9 767 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 UNC50Q53HI1 259 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 RBM20Q5T481 1227 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 IQSEC1Q6DN90 963 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 NEK10Q6ZWH5 1172 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CLYBLQ8N0X4 340 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 LINC01465Q8N7H1 131 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CHST13Q8NET6 341 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZFP90Q8TF47 636 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 NSMCE3Q96MG7 304 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 RDH12Q96NR8 316 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 BDH2Q9BUT1 245 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 CXCL16Q9H2A7 254 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 IFT52Q9Y366 437 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 NUP205Q92621 2012 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
SMARCAL1-201ENST00000357276 UBXN8O00124 270 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 GABARAPO95166 117 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 EEF1B2P24534 225 aaKnown RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 EEFSECP57772 596 aaKnown RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 OCA2Q04671 838 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 DAG1Q14118 895 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZBTB6Q15916 424 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 LY6KQ17RY6 165 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 TMEM214Q6NUQ4 689 aaKnown RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 KIAA0408Q6ZU52 694 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 WNT8BQ93098 351 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 BIRC7Q96CA5 298 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 AURKBQ96GD4 344 aaPredicted RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 RPL10LQ96L21 214 aaKnown RBP12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 CHST12Q9NRB3 414 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 UBP1Q9NZI7 540 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 DERAQ9Y315 318 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 PCDHGB1Q9Y5G3 927 aa12.08□□□□□ -0.47
SMARCAL1-201ENST00000357276 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 AURKAO14965 403 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 C22orf31O95567 290 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 NTRK1P04629 796 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 TCF3P15923 654 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 HTR1EP28566 365 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 ADORA2BP29275 332 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 ADRA1AP35348 466 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 ZNF33AQ06730 810 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 PERM1Q5SV97 790 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 SYPL2Q5VXT5 272 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 LRRC52Q8N7C0 313 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 ATP6V0D2Q8N8Y2 350 aa12.08□□□□□ -0.48
SMARCAL1-201ENST00000357276 CHDHQ8NE62 594 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms